학술논문

Out-of-Equilibrium Fluctuations Drive Correlations Between Enzyme and Metabolic Product Levels
Document Type
Conference
Source
2023 62nd IEEE Conference on Decision and Control (CDC) Decision and Control (CDC), 2023 62nd IEEE Conference on. :3750-3755 Dec, 2023
Subject
Computing and Processing
Power, Energy and Industry Applications
Robotics and Control Systems
Enzymes
Fluctuations
Correlation
Perturbation methods
Stochastic processes
Mathematical models
Steady-state
Metabolic Pathways
Enzymatic Reactions
Systems Biology
Chemical Master Equations
Language
ISSN
2576-2370
Abstract
Enzyme-driven catalysis of a substrate into a product forms the fundamental backbone of cellular metabolic pathways. In the deterministic formulation of such a reaction scheme, the equilibrium level of the metabolic product is independent of the steady-state enzyme, so that any perturbation in enzyme levels causes a transient change in metabolic product levels that perfectly adapts to the original enzyme-independent steady state. In this work, we consider a stochastic formulation of the problem, where enzyme levels constantly fluctuate due to the inherently noisy gene expression process as well as to the extrinsic noise in substrate availability. Our results show that such out-of-equilibrium fluctuations can result in positive (or negative) enzyme-product and substrate-product correlations, whose behavior qualitatively and quantitatively changes in different scenarios characterized by perturbations of nominal parameters and variable noise levels.