학술논문

SNR Enhancement for Multi-TE MRSI Using Joint Low-Dimensional Model and Spatial Constraints
Document Type
Periodical
Author
Source
IEEE Transactions on Biomedical Engineering IEEE Trans. Biomed. Eng. Biomedical Engineering, IEEE Transactions on. 69(10):3087-3097 Oct, 2022
Subject
Bioengineering
Computing and Processing
Components, Circuits, Devices and Systems
Communication, Networking and Broadcast Technologies
Data models
Signal to noise ratio
Noise reduction
Image reconstruction
Convolution
Training
Spatial resolution
Complex convolutional neural network
deep learning
denoising
low-dimensional modeling
++%24^{1}%24<%2Ftex-math>+<%2Finline-formula>+<%2Fnamed-content>H-MRSI%22">multi-TE $^{1}$ H-MRSI
regularized reconstruction
Language
ISSN
0018-9294
1558-2531
Abstract
We present a novel method to enhance the SNR for multi-TE MR spectroscopic imaging (MRSI) data by integrating learned nonlinear low-dimensional model and spatial constraints. A deep complex convolutional autoencoder (DCCAE) was developed to learn a nonlinear low-dimensional representation of the high-dimensional multi-TE $^{1}$H spectroscopy signals. The learned model significantly reduces the data dimension thus serving as an effective constraint for noise reduction. A reconstruction formulation was proposed to integrate the spatiospectral encoding model, the learned model, and a spatial constraint for an SNR-enhancing reconstruction from multi-TE data. The proposed method has been evaluated using both numerical simulations and in vivo brain MRSI experiments. The superior denoising performance of the proposed over alternative methods was demonstrated, both qualitatively and quantitatively. In vivo multi-TE data was used to assess the improved metabolite quantification reproducibility and accuracy achieved by the proposed method. We expect the proposed SNR-enhancing reconstruction to enable faster and/or higher-resolution multi-TE $^{1}$H-MRSI of the brain, potentially useful for various clinical applications.