학술논문

Implementation of Big Imaging Data Pipeline Adhering to FAIR Principles for Federated Machine Learning in Oncology
Document Type
Periodical
Source
IEEE Transactions on Radiation and Plasma Medical Sciences IEEE Trans. Radiat. Plasma Med. Sci. Radiation and Plasma Medical Sciences, IEEE Transactions on. 6(2):207-213 Feb, 2022
Subject
Nuclear Engineering
Engineered Materials, Dielectrics and Plasmas
Bioengineering
Computing and Processing
Fields, Waves and Electromagnetics
Radiomics
Feature extraction
Data mining
Imaging
Biomedical imaging
Cancer
Oncology
Artificial intelligence (AI)
findable
accessible
interoperable
and reusable (FAIR) data
machine learning
natural language processing (NLP)
radiomics
Language
ISSN
2469-7311
2469-7303
Abstract
Cancer is a fatal disease and one of the leading causes of death worldwide. The cure rate in cancer treatment remains low; hence, cancer treatment is gradually shifting toward personalized treatment. Artificial intelligence (AI) and radiomics have been recognized as one of the potential areas of research in personalized medicine in oncology. Several researchers have identified the capabilities of AI and radiomics to characterize phenotype and there by predict the outcome of treatment in oncology. Although AI and radiomics have shown promising initial results in diagnosis and treatment in oncology, these technologies are also facing challenges of standardization and scalability. In the last few years, researchers have been trying to develop a research infrastructure for federated machine learning that increases the usability of Big Data for clinical research. These research infrastructures are based on the findable, accessible, interoperable, and reusable (i.e., FAIR) data principles. The India-Dutch “big imaging data approach for oncology in a Netherlands India collaboration” (BIONIC) is a jointly funded initiative by the Dutch Research Council (NWO) and the Indian Ministry of Electronics and Information Technology (MeitY), aiming to introduce radiomic-based research into clinical environments using federated machine learning on geographically dispersed collections of FAIR data. This article described a prototype end-to-end research infrastructure implemented through the BIONIC partnership into a leading cancer care public hospital in India.