학술논문

Automatic Cell Counting From Microchannel Images
Document Type
Conference
Source
2022 30th Signal Processing and Communications Applications Conference (SIU) Signal Processing and Communications Applications Conference (SIU), 2022 30th. :1-4 May, 2022
Subject
Communication, Networking and Broadcast Technologies
Computing and Processing
Fields, Waves and Electromagnetics
Power, Energy and Industry Applications
Robotics and Control Systems
Signal Processing and Analysis
Image segmentation
Fluids
Filtering
Signal processing algorithms
Manuals
Recording
Object tracking
cell counting
object trekking
microchannel
Language
Abstract
Cell counting is used in many fields such as disease diagnosis in medicine, and there are manual and automatic methods developed for this purpose. Because manual methods are slow and error-prone, automated cell counting methods such as flow cytometry have been developed. Flow cytometry methods are based on analyzing cells one by one by passing the cell-containing fluid through a microchannel. These methods allow obtaining cell sizes in addition to automatic cell counting. In this study, an image processing and object tracking based method for automated cell counting and analysis is presented. This method is based on recording images with a camera as the cells are passed through the microchannel. Cell counting is done by automatic detection and tracking of cells over recorded images. Image processing methods such as filtering, background modeling, segmentation, opening and closing are used for the detection of cells, and Kalman filter and Hungarian assignment algorithm are used for tracking. Cell analysis includes the average velocity of cells in the microchannel, cell sizes, and classification of cells by K-medoids method. Experiment results showed that the proposed method counts cells accurately under appropriate experimental conditions and can make size-based classification for cells having different sizes, therefore it can be used as a direct or reference method in cell experiments.