학술논문

Deep Learning-Based Nuclei Segmentation of Cleared Brain Tissue
Document Type
Conference
Source
2019 IEEE High Performance Extreme Computing Conference (HPEC) High Performance Extreme Computing Conference (HPEC), 2019 IEEE. :1-2 Sep, 2019
Subject
Communication, Networking and Broadcast Technologies
Computing and Processing
Image segmentation
Neurons
Brain
Machine learning
Microscopy
Three-dimensional displays
Training
deep learning
low resource
neuron segmentation
transfer learning
Language
ISSN
2643-1971
Abstract
We present a deep learning approach for nuclei segmentation at scale. Our algorithm aims to address the challenge of segmentation in dense scenes with limited annotated data available. Annotation in this domain is highly manual in nature, requiring time-consuming markup of the neuron and extensive expertise, and often results in errors. For these reasons, the approach under consideration employs methods adopted from transfer learning. This approach can also be extended to segment other components of the neurons.