학술논문

LivePublication: The Science Workflow Creates and Updates the Publication
Document Type
Conference
Source
2023 IEEE 19th International Conference on e-Science (e-Science) e-Science (e-Science), 2023 IEEE 19th International Conference on. :1-10 Oct, 2023
Subject
Communication, Networking and Broadcast Technologies
Computing and Processing
General Topics for Engineers
Computer architecture
Containers
Natural language processing
computational science
publication
reproducibility
workflows
Language
ISSN
2325-3703
Abstract
The uptake of computational methods to support research has led to some remarkable new tools and methods to improve outcomes. But one unintended consequence is that the scientific record ends up being fragmented and distributed amongst several distinct systems. The research we report aims to gather together all of the components of an experiment into a single container—including the publication itself. We describe the architecture of such a system that marries together distributed workflows (Globus) with research object containers (RO-Crate) and adds new methods to describe, update and 'publish: the details of the workflow and its outcomes. Finally, we demonstrate the system with a natural language processing research use case.