학술논문

Group Testing With Side Information via Generalized Approximate Message Passing
Document Type
Periodical
Source
IEEE Transactions on Signal Processing IEEE Trans. Signal Process. Signal Processing, IEEE Transactions on. 71:2366-2375 2023
Subject
Signal Processing and Analysis
Communication, Networking and Broadcast Technologies
Computing and Processing
Testing
Noise measurement
Decoding
Approximation algorithms
Signal processing algorithms
Message passing
Pandemics
Compressed sensing
contact tracing
generalized approximate message passing (GAMP)
nonadaptive group testing
Language
ISSN
1053-587X
1941-0476
Abstract
Group testing can help maintain a widespread testing program using fewer resources amid a pandemic. In a group testing setup, we are given $n$ samples, one per individual. Each individual is either infected or uninfected. These samples are arranged into $m < n$ pooled samples, where each pool is obtained by mixing a subset of the $n$ individual samples. Infected individuals are then identified using a group testing algorithm. In this article, we incorporate side information (SI) collected from contact tracing (CT) into nonadaptive/single-stage group testing algorithms. We generate different types of CT SI data by incorporating different possible characteristics of the spread of disease. These data are fed into a group testing framework based on generalized approximate message passing (GAMP). Numerical results show that our GAMP-based algorithms provide improved accuracy.