학술논문

Transcriptomic analysis reveals the dynamic changes of transcription factors during early development of chicken embryo
Document Type
article
Source
BMC Genomics, Vol 23, Iss 1, Pp 1-19 (2022)
Subject
Embryogenesis
Chicken
Transcription factors
Gene expression
Network analysis
Biotechnology
TP248.13-248.65
Genetics
QH426-470
Language
English
ISSN
1471-2164
Abstract
Abstract Background The transition from fertilized egg to embryo in chicken requires activation of hundreds of genes that were mostly inactivated before fertilization, which is accompanied with various biological processes. Undoubtedly, transcription factors (TFs) play important roles in regulating the changes in gene expression pattern observed at early development. However, the contribution of TFs during early embryo development of chicken still remains largely unknown that need to be investigated. Therefore, an understanding of the development of vertebrates would be greatly facilitated by study of the dynamic changes in transcription factors during early chicken embryo. Results In the current study, we selected five early developmental stages in White Leghorn chicken, gallus gallus, for transcriptome analysis, cover 17,478 genes with about 807 million clean reads of RNA-sequencing. We have compared global gene expression patterns of consecutive stages and noted the differences. Comparative analysis of differentially expressed TFs (FDR