학술논문

Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B.1.1.7: an ecological study
Document Type
article
Author
Mark S Graham, PhDCarole H Sudre, PhDAnna May, MAMichela Antonelli, PhDBenjamin Murray, MScThomas Varsavsky, MScKerstin Kläser, MScLiane S Canas, PhDErika Molteni, PhDMarc Modat, PhDDavid A Drew, PhDLong H Nguyen, MDLorenzo Polidori, MScSomesh Selvachandran, MScChristina Hu, MAJoan Capdevila, PhDAlexander Hammers, ProfPhDAndrew T Chan, ProfMDJonathan Wolf, MATim D Spector, ProfPhDClaire J Steves, PhDSebastien Ourselin, ProfPhDCherian KoshyAmy AshEmma WiseNathan MooreMatilde MoriNick CortesJessica LynchStephen KiddDerek J FairleyTanya CurranJames P McKennaHelen AdamsChristophe FraserTanya GolubchikDavid BonsallMohammed O Hassan-IbrahimCassandra S MaloneBenjamin J CoggerMichelle WantochNicola ReynoldsBen WarneJoshua MaksimovicKarla SpellmanKathryn McCluggageMichaela JohnRobert BeerSafiah AfifiSian MorganAngela MarchbankAnna PriceChristine KitchenHuw GulliverIan MerrickJoel SouthgateMartyn GuestRobert MunnTrudy WorkmanThomas R ConnorWilliam FullerCatherine BresnerLuke B SnellAmita PatelThemoula CharalampousGaia NebbiaRahul BatraJonathan EdgeworthSamuel C RobsonAngela H BeckettDavid M AanensenAnthony P UnderwoodCorin A YeatsKhalil AbudahabBen EW TaylorMirko MenegazzoGemma ClarkWendy SmithManjinder KhakhVicki M FlemingMichelle M ListerHannah C Howson-WellsLouise BerryTim BoswellAmelia JosephIona WillinghamCarl JonesChristopher HolmesPaul BirdThomas HelmerKarlie FallonJulian TangVeena RaviprakashSharon CampbellNicola SheriffVictoria BlakeyLesley-Anne WilliamsMatthew W LooseNadine HolmesChristopher MooreMatthew CarlileVictoria WrightFei SangJohnny DebebeFrancesc CollAdrian W SignellGilberto BetancorHarry D WilsonSahar EldirdiriAnita KenyonThomas DavisOliver G PybusLouis du PlessisAlex E ZarebskiJayna RaghwaniMoritz UG KraemerSarah FrancoisStephen W AttwoodTetyana I VasylyevaMarina Escalera ZamudioBernardo GutierrezM. Estee TorokWilliam L HamiltonIan G GoodfellowGrant HallAminu S JahunYasmin ChaudhryMyra HosmilloMalte L PinckertIliana GeorganaSamuel MosesHannah LoweLuke BedfordJonathan MooreSusanne StonehouseChloe L FisherAli R AwanJohn BoYesJudith BreuerKathryn Ann HarrisJulianne Rose BrownDivya ShahLaura AtkinsonJack CD LeeNathaniel StoreyFlavia FlavianiAdela Alcolea-MedinaRebecca WilliamsGabrielle VernetMichael R ChapmanLisa J LevettJudith HeaneyWendy ChattertonMonika PusokLi Xu-McCraeDarren L SmithMatthew BashtonGregory R YoungAlison HolmesPaul Anthony RandellAlison CoxPinglawathee MadonaFrances BoltJames PriceSiddharth MookerjeeManon Ragonnet-CroninFabricia F. NascimentoDavid JorgensenIgor SiveroniRob JohnsonOlivia BoydLily GeidelbergErik M VolzAileen RowanGraham P TaylorKatherine L SmollettNicholas J LomanJoshua QuickClaire McMurrayJoanne StocktonSam NichollsWill RoweRadoslaw PoplawskiAlan McNallyRocio T Martinez NunezJenifer MasonTrevor I RobinsonElaine O'TooleJoanne WattsCassie BreenAngela CowellGraciela SlugaNicholas W MachinShazaad S Y AhmadRyan P GeorgeFenella HalsteadVenkat SivaprakasamWendy HogsdenChris J IllingworthChris JacksonEmma C ThomsonJames G ShepherdPatawee AsamaphanMarc O NiebelKathy K LiRajiv N ShahNatasha G JesudasonLily TongAlice BroosDaniel MairJenna NicholsStephen N CarmichaelKyriaki NomikouElihu Aranday-CortesNatasha JohnsonIgor StarinskijAna da Silva FilipeDavid L RobertsonRichard J OrtonJoseph HughesSreenu VattipallyJoshua B SingerSeema NickbakhshAntony D HaleLouissa R Macfarlane-SmithKatherine L HarperHolli CardenYusri TahaBrendan AI PayneShirelle Burton-FanningSheila WaughJennifer CollinsGary EltringhamSteven RushtonSarah O'BrienAmanda BradleyAlasdair MacleanGuy MollettRachel BlacowKate E TempletonMartin P McHughRebecca DewarElizabeth WastengeSamir DervisevicRachael StanleyEmma J MeaderLindsay CouplandLouise SmithClive GrahamEdward BartonDebra PadgettGarren ScottEmma SwindellsJane GreenawayAndrew NelsonClare M McCannWen C YewMonique AnderssonTimothy PetoAnita JusticeDavid EyreDerrick CrookTim J SloanNichola DuckworthSarah WalshAnoop J ChauhanSharon GlaysherKelly BicknellSarah WyllieScott ElliottAllyson LloydRobert ImpeyNick LeveneLynn MonaghanDeclan T BradleyTim WyattElias AllaraClare PearsonHusam OsmanAndrew BosworthEsther RobinsonPeter MuirIan B VipondRichard HopesHannah M PymontStephanie HutchingsMartin D CurranSurendra ParmarAngie LackenbyTamyo MbisaSteven PlattShahjahan MiahDavid BibbyCarmen MansoJonathan HubbMeera ChandGavin DabreraMary RamsayDaniel BradshawAlicia ThorntonRichard MyersUlf SchaeferNatalie GrovesEileen GallagherDavid LeeDavid WilliamsNicholas EllabyIan HarrisonHassan HartmanNikos ManesisVineet PatelChloe BishopVicki ChalkerJuan LedesmaKatherine A TwohigMatthew T.G. HoldenSharif ShaabanAlec BirchleyAlexander AdamsAlisha DaviesAmy GaskinAmy PlimmerBree Gatica-WilcoxCaoimhe McKerrCatherine MooreChris WilliamsDavid HeyburnElen De LacyEmber HilversFatima DowningGiri ShankarHannah JonesHibo AsadJason CoombesJoanne WatkinsJohnathan M EvansLaia FinaLaura GiffordLauren GilbertLee GrahamMalorie PerryMari MorganMatthew BullMichelle CroninNicole PacchiariniNoel CraineRachel JonesRobin HoweSally CordenSara ReySara Kumziene-SummerhaYesSarah TaylorSimon CottrellSophie JonesSue EdwardsJustin O'GradyAndrew J PageAlison E MatherDavid J BakerSteven RudderAlp AydinGemma L KayAlexander J TrotterNabil-Fareed AlikhanLeonardo de Oliveira MartinsThanh Le-VietLizzie MeadowsAnna CaseyLiz RatcliffeDavid A SimpsonZoltan MolnarThomas ThompsonErwan AchesonJane AH MasoliBridget A KnightSian EllardCressida AucklandChristopher R JonesTabitha W MahunguDianne Irish-TavaresTanzina HaqueJennifer HartEric WiteleMelisa Louise FentonAshok DadrahAmanda SymmondsTranprit SalujaYann BourgeoisGarry P ScarlettKatie F LovesonSalman GoudarziChristopher FearnKate CookHannah DentHannah PaulDavid G PartridgeMohammad RazaCariad EvansKate JohnsonSteven LiggettPaul BakerStephen BonnerSarah EssexRonan A LyonsKordo SaeedAdhyana I.K MahanamaBuddhini SamaraweeraSiona SilveiraEmanuela PelosiEleri Wilson-DaviesRachel J WilliamsMark KristiansenSunando RoyCharlotte A WilliamsMarius CoticNadua BayzidAdam P WesthorpeJohn A HartleyRiaz JannooHelen L LoweAngeliki KaramaniLeah EnsellJacqui A PrietoSarah JeremiahDimitris GrammatopoulosSarojini PandeyLisa BerryKatie JonesAlex RichterAndrew BeggsAngus BestBenita PercivalJeremy MirzaOliver MegramMegan MayhewLiam CrawfordFiona AshcroftEmma Moles-GarciaNicola CumleyColin P SmithGiselda BuccaAndrew R HeskethBeth BlaneSophia T GirgisDanielle LeekSushmita SridharSally ForrestClaire CormieHarmeet K GillJoana DiasEllen E HigginsonMailis MaesJamie YoungLeanne M KermackRavi Kumar GuptaCatherine LuddenSharon J PeacockSophie PalmerCarol M ChurcherNazreen F HadjirinAlessandro M CarabelliEllena BrooksKim S SmithKaterina GalaiGeorgina M McManusChris RuisRose K DavidsonAndrew RambautThomas WilliamsCarlos E BalcazarMichael D GallagherÁine O'TooleStefan RookeVerity HillKathleen A WilliamsonThomas D StantonStephen L MichellClaire M BewsheaBen TempertonMichelle L MichelsenJoanna Warwick-DugdaleRobin ManleyAudrey FarbosJames W HarrisonChristine M SamblesDavid J StudholmeAaron R JeffriesAlistair C DarbyJulian A HiscoxSteve PatersonMiren Iturriza-GomaraKathryn A JacksonAnita O LucaciEdith E VamosMargaret HughesLucille RainbowRichard EcclesCharlotte NelsonMark WhiteheadLance TurtleSam T HaldenbyRichard GregoryMatthew GemmellClaudia WierzbickiHermione J WebsterThushan I de SilvaNikki SmithAdrienn AngyalBenjamin B LindseyDanielle C GrovesLuke R GreenDennis WangTimothy M FreemanMatthew D ParkerAlexander J KeeleyPaul J ParsonsRachel M TuckerRebecca BrownMatthew WylesMax WhiteleyPeijun ZhangMarta GallisStavroula F LoukaChrystala ConstantinidouMeera UnnikrishnanSascha OttJeffrey K.J. ChengHannah E. BridgewaterLucy R. FrostGrace Taylor-JoyceRichard StarkLaura BaxterMohammad T. AlamPaul E BrownDinesh AggarwalAlberto C CerdaTammy V MerrillRebekah E WilsonPatrick C McClureJoseph G ChappellTheocharis TsoleridisJonathan BallDavid BuckJohn A ToddAngie GreenAmy TrebesGeorge MacIntyre-CockettMariateresa de CesareAlex AldertonRoberto AmatoCristina V ArianiMathew A BealeCharlotte BeaverKatherine L BellisEmma BetteridgeJames BonfieldJohn DaneshMatthew J DormanEleanor DruryBen W FarrLuke FoulserSonia GoncalvesScott GoodwinMarina GourtovaiaEwan M HarrisonDavid K JacksonDorota JamrozyIan JohnstonLeanne KaneSally KayJon-Paul KeatleyDominic KwiatkowskiCordelia F LangfordMara LawniczakLaura LetchfordRich LivettStephanie LoInigo MartincorenaSamantha McGuiganRachel NelsonSteve PalmerNaomi R ParkMinal PatelLiam PrestwoodChristoph PuetheMichael A QuailShavanthi RajatilekaCarol ScottLesley ShirleyJohn SillitoeMichael H Spencer ChapmanScott AJ ThurstonGerry Tonkin-HillDanni WeldonDiana RajanIraad F BronnerLouise AigrainNicholas M RedshawStefanie V LensingRobert DaviesAndrew WhitwhamJennifier LiddleKevin LewisJaime M Tovar-CoronaSteven LeonardJillian DurhamAndrew R BassettShane McCarthyRobin J MollKeith JamesKaren OliverAlex MakuninJeff BarrettRory N Gunson
Source
The Lancet Public Health, Vol 6, Iss 5, Pp e335-e345 (2021)
Subject
Public aspects of medicine
RA1-1270
Language
English
ISSN
2468-2667
Abstract
Summary: Background: The SARS-CoV-2 variant B.1.1.7 was first identified in December, 2020, in England. We aimed to investigate whether increases in the proportion of infections with this variant are associated with differences in symptoms or disease course, reinfection rates, or transmissibility. Methods: We did an ecological study to examine the association between the regional proportion of infections with the SARS-CoV-2 B.1.1.7 variant and reported symptoms, disease course, rates of reinfection, and transmissibility. Data on types and duration of symptoms were obtained from longitudinal reports from users of the COVID Symptom Study app who reported a positive test for COVID-19 between Sept 28 and Dec 27, 2020 (during which the prevalence of B.1.1.7 increased most notably in parts of the UK). From this dataset, we also estimated the frequency of possible reinfection, defined as the presence of two reported positive tests separated by more than 90 days with a period of reporting no symptoms for more than 7 days before the second positive test. The proportion of SARS-CoV-2 infections with the B.1.1.7 variant across the UK was estimated with use of genomic data from the COVID-19 Genomics UK Consortium and data from Public Health England on spike-gene target failure (a non-specific indicator of the B.1.1.7 variant) in community cases in England. We used linear regression to examine the association between reported symptoms and proportion of B.1.1.7. We assessed the Spearman correlation between the proportion of B.1.1.7 cases and number of reinfections over time, and between the number of positive tests and reinfections. We estimated incidence for B.1.1.7 and previous variants, and compared the effective reproduction number, Rt, for the two incidence estimates. Findings: From Sept 28 to Dec 27, 2020, positive COVID-19 tests were reported by 36 920 COVID Symptom Study app users whose region was known and who reported as healthy on app sign-up. We found no changes in reported symptoms or disease duration associated with B.1.1.7. For the same period, possible reinfections were identified in 249 (0·7% [95% CI 0·6–0·8]) of 36 509 app users who reported a positive swab test before Oct 1, 2020, but there was no evidence that the frequency of reinfections was higher for the B.1.1.7 variant than for pre-existing variants. Reinfection occurrences were more positively correlated with the overall regional rise in cases (Spearman correlation 0·56–0·69 for South East, London, and East of England) than with the regional increase in the proportion of infections with the B.1.1.7 variant (Spearman correlation 0·38–0·56 in the same regions), suggesting B.1.1.7 does not substantially alter the risk of reinfection. We found a multiplicative increase in the Rt of B.1.1.7 by a factor of 1·35 (95% CI 1·02–1·69) relative to pre-existing variants. However, Rt fell below 1 during regional and national lockdowns, even in regions with high proportions of infections with the B.1.1.7 variant. Interpretation: The lack of change in symptoms identified in this study indicates that existing testing and surveillance infrastructure do not need to change specifically for the B.1.1.7 variant. In addition, given that there was no apparent increase in the reinfection rate, vaccines are likely to remain effective against the B.1.1.7 variant. Funding: Zoe Global, Department of Health (UK), Wellcome Trust, Engineering and Physical Sciences Research Council (UK), National Institute for Health Research (UK), Medical Research Council (UK), Alzheimer's Society.