학술논문

Data supporting a saturation mutagenesis assay for Tat-driven transcription with the GigaAssay
Document Type
article
Source
Data in Brief, Vol 45, Iss , Pp 108641- (2022)
Subject
Tat
Transcription
High-throughput assay
Loss of Function (LOF)
Saturation mutagenesis
Protein structure
Computer applications to medicine. Medical informatics
R858-859.7
Science (General)
Q1-390
Language
English
ISSN
2352-3409
Abstract
The data in this article are associated with the research paper “GigaAssay – an adaptable high-throughput saturation mutagenesis assay” [1]. The raw data are sequence reads of HIV-1 Tat cDNA amplified from cellular genomic DNA in a new single-pot saturation mutagenesis assay designated the “GigaAssay”. A bioinformatic pipeline and parameters used to analyze the data. Raw, processed, analyzed, and filtered data are reported. The data is processed to calculate the Tat-driven transcription activity for cells with each possible single amino acid substitution in Tat. This data can be reused to interpret Tat intermolecular interactions and HIV latency. This is one of the largest and most complete datasets regarding the impact of amino acid substitutions within a single protein on a molecular function.