학술논문

Fully Automated Organ Segmentation in Male Pelvic CT Images
Document Type
Working Paper
Source
Balagopal A, Kazemifar S, Nguyen D, Lin M H, Hannan R, Owrangi A and Jiang S 2018 Fully automated organ segmentation in male pelvic CT images Phys. Med. Biol. 63 245015
Subject
Physics - Medical Physics
Computer Science - Computer Vision and Pattern Recognition
Language
Abstract
Accurate segmentation of prostate and surrounding organs at risk is important for prostate cancer radiotherapy treatment planning. We present a fully automated workflow for male pelvic CT image segmentation using deep learning. The architecture consists of a 2D localization network followed by a 3D segmentation network for volumetric segmentation of prostate, bladder, rectum, and femoral heads. We used a multi-channel 2D U-Net followed by a 3D U-Net with encoding arm modified with aggregated residual networks, known as ResNeXt. The models were trained and tested on a pelvic CT image dataset comprising 136 patients. Test results show that 3D U-Net based segmentation achieves mean (SD) Dice coefficient values of 90 (2.0)% ,96 (3.0)%, 95 (1.3)%, 95 (1.5)%, and 84 (3.7)% for prostate, left femoral head, right femoral head, bladder, and rectum, respectively, using the proposed fully automated segmentation method.
Comment: 21 pages; 11 figures; 4 tables