학술논문

Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge
Document Type
Working Paper
Author
LaBella, DominicBaid, UjjwalKhanna, OmadityaMcBurney-Lin, ShanMcLean, RyanNedelec, PierreRashid, ArifTahon, Nourel HodaAltes, TalissaBhalerao, RadhikaDhemesh, YaseenGodfrey, DevonHilal, FathiFloyd, ScottJanas, AnastasiaKazerooni, Anahita FathiKirkpatrick, JohnKent, CollinKofler, FlorianLeu, KevinMaleki, NazaninMenze, BjoernPajot, MaxenceReitman, Zachary J.Rudie, Jeffrey D.Saluja, RachitVelichko, YuryWang, ChunhaoWarman, PranavAdewole, MarufAlbrecht, JakeAnazodo, UdunnaAnwar, Syed MuhammadBergquist, TimothyChen, Sully FrancisChung, VerenaConte, Gian-MarcoDako, FaroukEddy, JamesEzhov, IvanKhalili, NastaranIglesias, Juan EugenioJiang, ZhifanJohanson, ElaineVan Leemput, KoenLi, Hongwei BranLinguraru, Marius GeorgeLiu, XinyangMahtabfar, AriaMeier, ZekeMoawad, Ahmed W.Mongan, JohnPiraud, MarieShinohara, Russell TakeshiWiggins, Walter F.Abayazeed, Aly H.Akinola, RachelJakab, AndrásBilello, Michelde Verdier, Maria CorreiaCrivellaro, PriscilaDavatzikos, ChristosFarahani, KeyvanFreymann, JohnHess, ChristopherHuang, RaymondLohmann, PhilippMoassefi, ManaPease, Matthew W.Vollmuth, PhillippSollmann, NicoDiffley, DavidNandolia, Khanak K.Warren, Daniel I.Hussain, AliFehringer, PascalBronstein, YuliaDeptula, LisaStein, Evan G.Taherzadeh, Mahsade Oliveira, Eduardo PortelaHaughey, AoifeKontzialis, MarinosSaba, LucaTurner, BenjaminBrüßeler, Melanie M. T.Ansari, ShehbazGkampenis, AthanasiosWeiss, David MaximilianMansour, AyaShawali, Islam H.Yordanov, NikolayStein, Joel M.Hourani, RoulaMoshebah, Mohammed YahyaAbouelatta, Ahmed MagdyRizvi, TanvirWillms, KlaraMartin, Dann C.Okar, AbdullahD'Anna, GennaroTaha, AhmedSharifi, YasamanFaghani, ShahriarKite, DominicPinho, MarcoHaider, Muhammad AmmarAristizabal, AlejandroKarargyris, AlexandrosKassem, HasanPati, SarthakSheller, MicahAlonso-Basanta, MichelleVillanueva-Meyer, JavierRauschecker, Andreas M.Nada, AymanAboian, MariamFlanders, Adam E.Wiestler, BenediktBakas, SpyridonCalabrese, Evan
Source
Subject
Electrical Engineering and Systems Science - Image and Video Processing
Computer Science - Computer Vision and Pattern Recognition
Computer Science - Machine Learning
Language
Abstract
We describe the design and results from the BraTS 2023 Intracranial Meningioma Segmentation Challenge. The BraTS Meningioma Challenge differed from prior BraTS Glioma challenges in that it focused on meningiomas, which are typically benign extra-axial tumors with diverse radiologic and anatomical presentation and a propensity for multiplicity. Nine participating teams each developed deep-learning automated segmentation models using image data from the largest multi-institutional systematically expert annotated multilabel multi-sequence meningioma MRI dataset to date, which included 1000 training set cases, 141 validation set cases, and 283 hidden test set cases. Each case included T2, T2/FLAIR, T1, and T1Gd brain MRI sequences with associated tumor compartment labels delineating enhancing tumor, non-enhancing tumor, and surrounding non-enhancing T2/FLAIR hyperintensity. Participant automated segmentation models were evaluated and ranked based on a scoring system evaluating lesion-wise metrics including dice similarity coefficient (DSC) and 95% Hausdorff Distance. The top ranked team had a lesion-wise median dice similarity coefficient (DSC) of 0.976, 0.976, and 0.964 for enhancing tumor, tumor core, and whole tumor, respectively and a corresponding average DSC of 0.899, 0.904, and 0.871, respectively. These results serve as state-of-the-art benchmarks for future pre-operative meningioma automated segmentation algorithms. Additionally, we found that 1286 of 1424 cases (90.3%) had at least 1 compartment voxel abutting the edge of the skull-stripped image edge, which requires further investigation into optimal pre-processing face anonymization steps.
Comment: 16 pages, 11 tables, 10 figures, MICCAI