학술논문

PatchSorter: A High Throughput Deep Learning Digital Pathology Tool for Object Labeling
Document Type
Working Paper
Source
Subject
Quantitative Biology - Quantitative Methods
Computer Science - Artificial Intelligence
Computer Science - Computer Vision and Pattern Recognition
Computer Science - Human-Computer Interaction
Electrical Engineering and Systems Science - Image and Video Processing
Language
Abstract
The discovery of patterns associated with diagnosis, prognosis, and therapy response in digital pathology images often requires intractable labeling of large quantities of histological objects. Here we release an open-source labeling tool, PatchSorter, which integrates deep learning with an intuitive web interface. Using >100,000 objects, we demonstrate a >7x improvement in labels per second over unaided labeling, with minimal impact on labeling accuracy, thus enabling high-throughput labeling of large datasets.
Comment: The submission includes 15 pages, 8 figures, 1 table, and 30 references. It is a new submission