학술논문

Phylogenetic analyses of Nitella subgenus Tieffallenia (Charales, Charophyceae) using nuclear ribosomal DNA internal transcribed spacer sequences
Document Type
Article
Source
Phycologia; November 2004, Vol. 43 Issue: 6 p672-681, 10p
Subject
Language
ISSN
00318884
Abstract
AbstractNucleotide sequences from the nuclear ribosomal DNA internal transcribed spacers (ITS1 and ITS2) and 5.8S ribosomal RNA (rRNA) gene were obtained for 13 Nitellaspecies belonging to the subgenus Tieffalleniain order to test the chloroplast gene phylogeny previously used for taxonomic studies. The phylogenetic relationships of the 13 Nitellaspecies based on nuclear DNA markers were congruent with those in the chloroplast gene phylogeny using the combined sequence data set for the genes encoding the beta subunit of ATP synthase (atpB) and the large subunit of Rubisco (rbcL). Therefore, the chloroplast gene phylogeny at the species level within the subgenus Tieffalleniaseems to be unaffected by the maternal inheritance of chloroplast genes and can be used to obtain a natural taxonomy at the species level. This may result from the monoecious sexual reproduction that occurs in all the Nitellaspecies examined. Phylogenetic analyses based on the concatenated chloroplast atpB and rbcL and nuclear 5.8S rRNA and ITS sequences generally gave higher resolution at or above species level within the subgenus Tieffalleniathan the ITS–5.8S rRNA phylogeny or the rbcL–alpB analyses.