학술논문

Familial adult myoclonic epilepsy type 1 SAMD12TTTCA repeat expansion arose 17,000 years ago and is present in Sri Lankan and Indian families
Document Type
Article
Source
European Journal of Human Genetics: EJHG; July 2020, Vol. 28 Issue: 7 p973-978, 6p
Subject
Language
ISSN
10184813; 14765438
Abstract
Familial adult myoclonic epilepsy 1 (FAME1), first recognised in Japanese families, was recently shown to be caused by a TTTCA repeat insertion in intron 4 of SAMD12on chromosome 8. We performed whole genome sequencing on two families with FAME, one of Sri Lankan origin and the other of Indian origin, and identified a TTTCA repeat insertion in SAMD12in both families. Haplotype analysis revealed that both families shared the same core ancestral haplotype reported in Japanese and Chinese families with FAME1. Mutation dating, based on the length of shared haplotypes, estimated the age of the ancestral haplotype to be ~670 generations, or 17,000 years old. Our data extend the geographic range of this repeat expansion to Southern Asia and potentially implicate an even broader regional distribution given the age of the variant. This finding suggests patients of Asian ancestry with suspected FAME should be screened for the SAMD12TTTCA expansion.