학술논문

The 2-oxoglutarate binding site of prolyl 4-hydroxylase. Identification of distinct subsites and evidence for 2-oxoglutarate decarboxylation in a ligand reaction at the enzyme-bound ferrous ion.
Document Type
Article
Source
European Journal of Biochemistry. 1/16/84, Vol. 138 Issue 2, p239-245. 7p.
Subject
*DECARBOXYLATION
*BINDING sites
*LIGANDS (Biochemistry)
*AROMATIC compounds
*IRON ions
*ENZYMES
Language
ISSN
0014-2956
Abstract
The structure and function of the 2-oxoglutarate binding site prolyl 4-hydroxylase was studied by assaying the inhibitory potential of 24 selected aliphatic or aromatic compounds. All except one of them inhibited the enzyme competitively with respect to 2-oxoglutarate and noncompetitively with respect to Fe2+, the KIvalue ranging from 0.8 µM to over 15 mM. The K1 values for the two most effective inhibitors, pyridine 2,5-dicarboxylate and 2,4-dicarboxylate, were about 0.8µM and 2µM, these compounds being the most potent inhibitors of prolyl 4-hydroxylase with respect to 2-oxoglutarate known so far. Only one of the compounds tested, 2-oxodiopinate, was able to support hydroxylation by replacing 2-oxoglutarate as a cosubtrate. The data suggest that the 2-oxoglutarate binding site can be divided into three district subsites. Subsite I, is probably a positively charged side chain of the enzyme that ionically binds the C5 carboxyl group of the 2-oxoglutarate, subsite II consists of two cis-positioned equatorial coordination sites of the enzyme-bound ferrous ion and is chelated by the C2-C2 moiety, while subsite III involves a hydrophobic binding site in the C3-C4 region of the cosubstrate. The sp3 rehybridization of C2 within the chelating moiety of the cosubstrate appears to be a crucial event during decarboxylation that proceed in the form of a ligand reaction inside the Fe2+coordination sphere. [ABSTRACT FROM AUTHOR]