학술논문

A General Computational Approach for Repeat Protein Design.
Document Type
Article
Source
Journal of Molecular Biology. Jan2015, Vol. 427 Issue 2, p563-575. 13p.
Subject
*COMPUTATIONAL biology
*PROTEIN engineering
*BINDING agents
*BIOMATERIALS
*BIOMEDICAL engineering
*NANOTECHNOLOGY
*HEAT stability in proteins
Language
ISSN
0022-2836
Abstract
Repeat proteins have considerable potential for use as modular binding reagents or biomaterials in biomedical and nanotechnology applications. Here we describe a general computational method for building idealized repeats that integrates available family sequences and structural information with Rosetta de novo protein design calculations. Idealized designs from six different repeat families were generated and experimentally characterized; 80% of the proteins were expressed and soluble and more than 40% were folded and monomeric with high thermal stability. Crystal structures determined for members of three families are within 1 Å root-mean-square deviation to the design models. The method provides a general approach for fast and reliable generation of stable modular repeat protein scaffolds. [ABSTRACT FROM AUTHOR]