학술논문

A non‐proteolytic release mechanism for HMCES‐DNA‐protein crosslinks.
Document Type
Article
Source
EMBO Journal. 9/18/2023, Vol. 42 Issue 18, p1-17. 17p.
Subject
*DNA structure
*SINGLE-stranded DNA
*ENDONUCLEASES
*DNA
*GLUTAMIC acid
*DNA repair
Language
ISSN
0261-4189
Abstract
The conserved protein HMCES crosslinks to abasic (AP) sites in ssDNA to prevent strand scission and the formation of toxic dsDNA breaks during replication. Here, we report a non‐proteolytic release mechanism for HMCES‐DNA‐protein crosslinks (DPCs), which is regulated by DNA context. In ssDNA and at ssDNA‐dsDNA junctions, HMCES‐DPCs are stable, which efficiently protects AP sites against spontaneous incisions or cleavage by APE1 endonuclease. In contrast, HMCES‐DPCs are released in dsDNA, allowing APE1 to initiate downstream repair. Mechanistically, we show that release is governed by two components. First, a conserved glutamate residue, within HMCES' active site, catalyses reversal of the crosslink. Second, affinity to the underlying DNA structure determines whether HMCES re‐crosslinks or dissociates. Our study reveals that the protective role of HMCES‐DPCs involves their controlled release upon bypass by replication forks, which restricts DPC formation to a necessary minimum. Synopsis: The protein HMCES forms covalent crosslinks with abasic sites in ssDNA to prevent the formation of toxic dsDNA breaks. This study reports a non‐proteolytic release mechanism that restricts formation of HMCES‐DNA crosslinks to a necessary minimum, and that is regulated by DNA context. HMCES‐DNA crosslinks are stable in ssDNA and at ssDNA‐dsDNA junctions, thereby protecting abasic sites against incisions.In dsDNA, HMCES‐DNA crosslinks are released, allowing APE1 to incise the abasic site to initiate repair.Release requires a conserved glutamate residue within HMCES' active site, which catalyses reversal of the crosslink.Affinity to the underlying DNA structure determines whether HMCES re‐crosslinks or releases the abasic site. [ABSTRACT FROM AUTHOR]