학술논문

Prediction of ADMET Properties of Anti-Breast Cancer Compounds Using Three Machine Learning Algorithms.
Document Type
Article
Source
Molecules. Mar2023, Vol. 28 Issue 5, p2326. 14p.
Subject
*MACHINE learning
*DRUG design
*CYTOCHROME P-450 CYP3A
*BOOSTING algorithms
*PREDICTION models
*PARTIAL least squares regression
*FORECASTING
Language
ISSN
1420-3049
Abstract
In recent years, machine learning methods have been applied successfully in many fields. In this paper, three machine learning algorithms, including partial least squares-discriminant analysis (PLS-DA), adaptive boosting (AdaBoost), and light gradient boosting machine (LGBM), were applied to establish models for predicting the Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET for short) properties, namely Caco-2, CYP3A4, hERG, HOB, MN of anti-breast cancer compounds. To the best of our knowledge, the LGBM algorithm was applied to classify the ADMET property of anti-breast cancer compounds for the first time. We evaluated the established models in the prediction set using accuracy, precision, recall, and F1-score. Compared with the performance of the models established using the three algorithms, the LGBM yielded most satisfactory results (accuracy > 0.87, precision > 0.72, recall > 0.73, and F1-score > 0.73). According to the obtained results, it can be inferred that LGBM can establish reliable models to predict the molecular ADMET properties and provide a useful tool for virtual screening and drug design researchers. [ABSTRACT FROM AUTHOR]