학술논문

Transcription Factor Binding to a DNA Zip Code Controls Interchromosomal Clustering at the Nuclear Periphery
Document Type
Article
Source
Developmental Cell. 6/12/2012, Vol. 22 Issue 6, p1234-1246. 13p.
Subject
*TRANSCRIPTION factors
*CARRIER proteins
*GENETIC code
*CHROMOSOMES
*NUCLEAR proteins
*DNA-protein interactions
*GENOMES
Language
ISSN
1534-5807
Abstract
Summary: Active genes in yeast can be targeted to the nuclear periphery through interaction of cis-acting “DNA zip codes” with the nuclear pore complex. We find that genes with identical zip codes cluster together. This clustering was specific; pairs of genes that were targeted to the nuclear periphery by different zip codes did not cluster together. Insertion of two different zip codes (GRS I or GRS III) at an ectopic site induced clustering with endogenous genes that have that zip code. Targeting to the nuclear periphery and interaction with the nuclear pore is a prerequisite for gene clustering, but clustering can be maintained in the nucleoplasm. Finally, we find that the Put3 transcription factor recognizes the GRS I zip code to mediate both targeting to the NPC and interchromosomal clustering. These results suggest that zip-code-mediated clustering of genes at the nuclear periphery influences the three-dimensional arrangement of the yeast genome. [Copyright &y& Elsevier]