학술논문

A genome-wide association study in Caucasian women suggests the involvement of HLA genes in the severity of facial solar lentigines.
Document Type
Article
Source
Pigment Cell & Melanoma Research. Sep2016, Vol. 29 Issue 5, p550-558. 10p.
Subject
*LENTIGO
*METASTASIS
*SKIN aging
*GENETICS
*GENOMES
Language
ISSN
1755-1471
Abstract
Solar lentigines are a common feature of sun-induced skin ageing. Little is known, however, about the genetic factors contributing to their development. In this genome-wide association study, we aimed to identify genetic loci associated with solar lentigines on the face in 502 middle-aged French women. Nine SNPs, gathered in two independent blocks on chromosome 6, exhibited a false discovery rate below 25% when looking for associations with the facial lentigine score. The first block, in the 6p22 region, corresponded to intergenic SNPs and also exhibited a significant association with forehead lentigines (P = 1.37 × 10−8). The second block, within the 6p21 HLA region, was associated with decreased HLA-C expression according to several eQTL databases. Interestingly, these SNPs were also in high linkage disequilibrium with the HLA-C*0701 allele ( r2 = 0.95). We replicated an association recently found by GWAS in the IRF4 gene. Finally, a complementary study on 44 selected candidate SNPs revealed novel associations in the MITF gene. Overall, our results point to several mechanisms involved in the severity of facial lentigines, including HLA/immunity and the melanogenesis pathway. [ABSTRACT FROM AUTHOR]