학술논문

Polyketide Synthase Gene Diversity within the Microbiome of the Sponge Arenosclera brasiliensis, Endemic to the Southern Atlantic Ocean.
Document Type
Article
Source
Applied & Environmental Microbiology. Mar2013, Vol. 79 Issue 5, p1598-1605. 8p.
Subject
*POLYKETIDE synthases
*HAPLOSCLERIDA
*CLADISTIC analysis
*RIBOSOMAL RNA
*ACYL coenzyme A
*LIPOPOLYSACCHARIDES
*NONRIBOSOMAL peptide synthetases
Language
ISSN
0099-2240
Abstract
Microbes associated with marine sponges are considered important producers of bioactive, structurally unique polyketides. The synthesis of such secondary metabolites involves type I polyketide synthases (PKSs), which are enzymes that reach a maximum complexity degree in bacteria. The Haplosclerida spongeArenosclera brasiliensis hosts a complex microbiota and is the source of arenosclerins, alkaloids with cytotoxic and antibacterial activity. In the present investigation, we performed high-throughput sequencing of the ketosynthase (KS) amplicon to investigate the diversity of PKS genes present in the metagenome of A. brasiliensis. Almost 4,000 ketosynthase reads were recovered, with about 90% annotated automatically as bacterial. A total of 235 bacterial KS contigs was rigorously assembled from this sequence pool and submitted to phylogenetic analysis. A great diversity of six type I PKS groups has been consistently detected in our phylogenetic reconstructions, including a novel and A. brasiliensis-exclusive group. Our study is the first to reveal the diversity of type I PKS genes inA. brasiliensis as well as the potential of its microbiome to serve as a source of new polyketides. [ABSTRACT FROM AUTHOR]