학술논문

The nPYc-Toolbox, a Python module for the pre-processing, quality-control and analysis of metabolic profiling datasets.
Document Type
Article
Source
Bioinformatics. 12/15/2019, Vol. 35 Issue 24, p5359-5360. 2p.
Subject
*METABOLIC profile tests
*PYTHON programming language
*QUALITY control
*QUANTITATIVE research
*STATISTICS
Language
ISSN
1367-4803
Abstract
Summary As large-scale metabolic phenotyping studies become increasingly common, the need for systemic methods for pre-processing and quality control (QC) of analytical data prior to statistical analysis has become increasingly important, both within a study, and to allow meaningful inter-study comparisons. The nPYc-Toolbox provides software for the import, pre-processing, QC and visualization of metabolic phenotyping datasets, either interactively, or in automated pipelines. Availability and implementation The nPYc-Toolbox is implemented in Python, and is freely available from the Python package index https://pypi.org/project/nPYc/ , source is available at https://github.com/phenomecentre/nPYc-Toolbox. Full documentation can be found at http://npyc-toolbox.readthedocs.io/ and exemplar datasets and tutorials at https://github.com/phenomecentre/nPYc-toolbox-tutorials. [ABSTRACT FROM AUTHOR]