학술논문

BRAFV600 variant allele frequency predicts outcome in metastatic melanoma patients treated with BRAF and MEK inhibitors.
Document Type
Article
Source
Journal of the European Academy of Dermatology & Venereology. Oct2023, Vol. 37 Issue 10, p1991-1998. 8p.
Subject
*NUCLEOTIDE sequencing
*GENE frequency
*BRAF genes
*GENE amplification
*MELANOMA
Language
ISSN
0926-9959
Abstract
Background: The prognostic impact of variant allele frequency (VAF) on clinical outcome in BRAFV600 mutated metastatic melanoma patients (MMPs) receiving BRAF (BRAFi) and MEK inhibitors (MEKi) is unclear. Materials and Methods: A cohort of MMPs receiving first line BRAFi and MEKi was identified by inspecting dedicated databases of three Italian Melanoma Intergroup centres. VAF was determined by next generation sequencing in pre‐treatment baseline tissue samples. Correlation between VAF and BRAF copy number variation was analysed in an ancillary study by using a training and a validation cohort of melanoma tissue samples and cell lines. Results: Overall, 107 MMPs were included in the study. The VAF cut‐off determined by ROC curve was 41.3%. At multivariate analysis, progression‐free survival (PFS) was significantly shorter in patients with M1c/M1d [HR 2.25 (95% CI 1.41–3.6, p < 0.01)], in those with VAF >41.3% [HR 1.62 (95% CI 1.04–2.54, p < 0.05)] and in those with ECOG PS ≥1 [HR 1.82 (95% CI 1.15–2.88, p < 0.05)]. Overall survival (OS) was significantly shorter in patients with M1c/M1d [HR 2.01 (95% CI 1.25–3.25, p < 0.01)]. Furthermore, OS was shorter in patients with VAF >41.3% [HR 1.46 (95% CI 0.93–2.29, p = 0.06)] and in patients with ECOG PS ≥1 [HR 1.52 (95% CI 0.94–2.87, p = 0.14)]. BRAF gene amplification was found in 11% and 7% of samples in the training and validation cohort, respectively. Conclusions: High VAF is an independent poor prognostic factor in MMP receiving BRAFi and MEKi. High VAF and BRAF amplification coexist in 7%–11% of patients. [ABSTRACT FROM AUTHOR]