학술논문

Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA.
Document Type
Article
Source
PLoS Computational Biology. 7/16/2015, Vol. 11 Issue 7, p1-22. 22p. 2 Diagrams, 1 Chart, 9 Graphs.
Subject
*HYDROPHOBIC interactions
*ION channels
*MAGNESIUM ions
*MOLECULAR dynamics
*ALLOSTERIC regulation
Language
ISSN
1553-734X
Abstract
Ion channels catalyze ionic permeation across membranes via water-filled pores. To understand how changes in intracellular magnesium concentration regulate the influx of Mg2+ into cells, we examine early events in the relaxation of Mg2+ channel CorA toward its open state using massively-repeated molecular dynamics simulations conducted either with or without regulatory ions. The pore of CorA contains a 2-nm-long hydrophobic bottleneck which remained dehydrated in most simulations. However, rapid hydration or “wetting” events concurrent with small-amplitude fluctuations in pore diameter occurred spontaneously and reversibly. In the absence of regulatory ions, wetting transitions are more likely and include a wet state that is significantly more stable and more hydrated. The free energy profile for Mg2+ permeation presents a barrier whose magnitude is anticorrelated to pore diameter and the extent of hydrophobic hydration. These findings support an allosteric mechanism whereby wetting of a hydrophobic gate couples changes in intracellular magnesium concentration to the onset of ionic conduction. [ABSTRACT FROM AUTHOR]