학술논문

Haplotype‐resolved DNA methylome of African cassava genome.
Document Type
Article
Source
Plant Biotechnology Journal. Feb2023, Vol. 21 Issue 2, p247-249. 3p.
Subject
*CASSAVA
*DNA
*GENOMES
*RNA polymerases
*DNA methylation
*GENE expression
*DNA methyltransferases
Language
ISSN
1467-7644
Abstract
Interestingly, complete ASE genes showed higher gene body CHG methylation than partial ( I P i = 0.05) and non-ASE genes and partial ASE genes showed lower CG methylation than others ( I P i = 3.8 e-08, Figure 1g), suggesting that DNA methylation alterations between alleles from different haplotypes are frequently accompanied with ASEs. Since the cassava genome is highly heterozygous, DNA methylome of the haplotype-collapsed genome misses many features of the methylome. Keywords: haplotype-resolved; DNA methylation; cassava EN haplotype-resolved DNA methylation cassava 247 249 3 01/31/23 20230201 NES 230201 Cytosine DNA methylation is involved in transposable element (TE) silencing, imprinting and X-chromosome inactivation. [Extracted from the article]