학술논문

Lin28A Binds Active Promoters and Recruits Tet1 to Regulate Gene Expression.
Document Type
Article
Source
Molecular Cell. Jan2016, Vol. 61 Issue 1, p153-160. 8p.
Subject
*GENETIC regulation
*PROMOTERS (Genetics)
*NUCLEOTIDE sequencing
*METHYLCYTOSINE
*EMBRYONIC stem cells
*IMMUNOMODULATORS
Language
ISSN
1097-2765
Abstract
Summary Lin28, a well-known RNA-binding protein, regulates diverse cellular properties. All physiological functions of Lin28A characterized so far have been attributed to its repression of let-7 miRNA biogenesis or modulation of mRNA translational efficiency. Here we show that Lin28A directly binds to a consensus DNA sequence in vitro and in mouse embryonic stem cells in vivo. ChIP-seq and RNA-seq reveal enrichment of Lin28A binding around transcription start sites and a positive correlation between its genomic occupancy and expression of many associated genes. Mechanistically, Lin28A recruits 5-methylcytosine-dioxygenase Tet1 to genomic binding sites to orchestrate 5-methylcytosine and 5-hydroxymethylcytosine dynamics. Either Lin28A or Tet1 knockdown leads to dysregulated DNA methylation and expression of common target genes. These results reveal a surprising role for Lin28A in transcriptional regulation via epigenetic DNA modifications and have implications for understanding mechanisms underlying versatile functions of Lin28A in mammalian systems. [ABSTRACT FROM AUTHOR]