학술논문

Plant eco-devo: the potential of poplar as a model organism.
Document Type
Article
Source
New Phytologist. Apr2005, Vol. 166 Issue 1, p39-48. 10p. 6 Color Photographs, 2 Charts.
Subject
*PLANT ecology
*DEVELOPMENTAL genetics
*POPLARS
*BLACK cottonwood
*GENETIC polymorphisms
Language
ISSN
0028-646X
Abstract
Ecological developmental genetics is the study of how ecologically significant traits originate in the genome and how the allelic combinations responsible are maintained in populations and species. Plant development involves a continuous feedback between growth and environment and the success of individual genotype × environment interactions determines the passage of alleles to the next generation: the adaptive recursion. Outbreeding plants contain a large amount of genetic variation, mostly in the form of single nucleotide polymorphisms (SNPs). One of the challenges of eco-devo is to distinguish neutral SNPs from those with ecological consequences. The complete genome sequence ofPopulus trichocarpaTorr.&A. Gray will be a significant aid in this endeavour. Occurring from California to Alaska, this is the first ecologically‘keystone’ species to be sequenced. It has a rich natural history and is an obligate outbreeder. The individual sequenced, Nisqually-1, appears to be heterozygous on average about every 100 bp over thec. 500 million bp of the genome. Overlaid on this within-individual variation is some ecologically based between-individual genotypic variation evident across the distribution of the species. The synthesis of information from genomics and ecology is now in prospect. This‘ecomolecular synthesis’ is likely to provide a rich insight into the genomic basis of plant adaptation.New Phytologist(2005)doi: 10.1111/j.1469-8137.2005.01369.x© New Phytologist(2005) [ABSTRACT FROM AUTHOR]