학술논문

Genome-wide association studies on Northern Italy isolated populations provide further support concerning genetic susceptibility for major depressive disorder.
Document Type
Article
Source
World Journal of Biological Psychiatry. Feb2023, Vol. 24 Issue 2, p135-148. 14p.
Subject
*GENOME-wide association studies
*DISEASE risk factors
*GENETIC variation
*MONOGENIC & polygenic inheritance (Genetics)
*MENTAL illness
*PHENOTYPES
Language
ISSN
1562-2975
Abstract
Major depressive disorder (MDD) is a psychiatric disorder with pathogenesis influenced by both genetic and environmental factors. To date, the molecular-level understanding of its aetiology remains unclear. Thus, we aimed to identify genetic variants and susceptibility genes for MDD with a genome-wide association study (GWAS) approach. We performed a meta-analysis of GWASs and a gene-based analysis on two Northern Italy isolated populations (cases/controls n = 166/472 and 33/320), followed by replication and polygenic risk score (PRS) analyses in Italian independent samples (cases n = 464, controls n = 339). We identified two novel MDD-associated genes, KCNQ5 (lead SNP rs867262, p = 3.82 × 10−9) and CTNNA2 (rs6729523, p = 1.25 × 10−8). The gene-based analysis revealed another six genes (p < 2.703 × 10−6): GRM7, CTNT4, SNRK, SRGAP3, TRAPPC9, and FHIT. No replication of the genome-wide significant SNPs was found in the independent cohort, even if 14 SNPs around CTNNA2 showed association with MDD and related phenotypes at the nominal level of p (<0.05). Furthermore, the PRS model developed in the discovery cohort discriminated cases and controls in the replication cohort. Our work suggests new possible genes associated with MDD, and the PRS analysis confirms the polygenic nature of this disorder. Future studies are required to better understand the role of these findings in MDD. [ABSTRACT FROM AUTHOR]