학술논문

Gaussian curvature and the budding kinetics of enveloped viruses.
Document Type
Article
Source
PLoS Computational Biology. 8/21/2019, Vol. 15 Issue 8, p1-23. 23p. 2 Color Photographs, 6 Graphs.
Subject
*ACTIVATION energy
*COMPUTATIONAL biology
*POTENTIAL barrier
*PHYSICAL sciences
*MATHEMATICAL continuum
*GAUSSIAN curvature
Language
ISSN
1553-734X
Abstract
The formation of a membrane-enveloped virus starts with the assembly of a curved layer of capsid proteins lining the interior of the plasma membrane (PM) of the host cell. This layer develops into a spherical shell (capsid) enveloped by a lipid-rich membrane. In many cases, the budding process stalls prior to the release of the virus. Recently, Brownian dynamics simulations of a coarse-grained model system reproduced protracted pausing and stalling, which suggests that the origin of pausing/stalling is to be found in the physics of the budding process. Here, we propose that the pausing/stalling observed in the simulations can be understood as a purely kinetic phenomenon associated with the neck geometry. A geometrical potential energy barrier develops during the budding that must be overcome by capsid proteins diffusing along the membrane prior to incorporation into the capsid. The barrier is generated by a conflict between the positive Gauss curvature of the assembling capsid and the negative Gauss curvature of the neck region. A continuum theory description is proposed and is compared with the Brownian simulations of the budding of enveloped viruses. [ABSTRACT FROM AUTHOR]