학술논문

Exploring multisite heterogeneity of human basal cell carcinoma proteome and transcriptome.
Document Type
Article
Source
PLoS ONE. 11/10/2023, Vol. 18 Issue 11, p1-16. 16p.
Subject
*BASAL cell carcinoma
*GENE expression
*GENE expression profiling
*HETEROGENEITY
*TRANSCRIPTOMES
*PROTEOMICS
Language
ISSN
1932-6203
Abstract
Basal cell carcinoma (BCC) is the most common type of skin cancer. Due to multiple, potential underlying molecular tumor aberrations, clinical treatment protocols are not well-defined. This study presents multisite molecular heterogeneity profiles of human BCC based on RNA and proteome profiling. Three areas from lesions excised from 9 patients were analyzed. The focus was gene expression profiles based on proteome and RNA measurements of intra-tumor heterogeneity from the same patient and inter-tumor heterogeneity in nodular, infiltrative, and superficial BCC tumor subtypes from different patients. We observed significant overlap in intra- and inter-tumor variability of proteome and RNA expression profiles, showing significant multisite heterogeneity of protein expression in the BCC tumors. Inter-subtype analysis has also identified unique proteins for each BCC subtype. This profiling leads to a deeper understanding of BCC molecular heterogeneity and potentially contributes to developing new sampling tools for personalized diagnostics therapeutic approaches to BCC. [ABSTRACT FROM AUTHOR]