학술논문

A common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome
Document Type
article
Author
Aung, TinOzaki, MineoMizoguchi, TakanoriAllingham, R RandLi, ZhengHaripriya, AravindNakano, SatokoUebe, SteffenHarder, Jeffrey MChan, Anita SYLee, Mei ChinBurdon, Kathryn PAstakhov, Yury SAbu-Amero, Khaled KZenteno, Juan CNilgün, YildirimZarnowski, TomaszPakravan, MohammadSafieh, Leen AbuJia, LiyunWang, Ya XingWilliams, SusanPaoli, DanielaSchlottmann, Patricio GHuang, LulinSim, Kar SengFoo, Jia NeeNakano, MasakazuIkeda, YokoKumar, Rajesh SUeno, MorioManabe, Shin-ichiHayashi, KenKazama, ShigeyasuIdeta, RyuichiMori, YosaiMiyata, KazunoriSugiyama, KazuhisaHigashide, TomomiChihara, EtsuoInoue, KenjiIshiko, SatoshiYoshida, AkitoshiYanagi, MasahideKiuchi, YoshiakiAihara, MakotoOhashi, TsutomuSakurai, ToshiyaSugimoto, TakakoChuman, HidekiMatsuda, FumihikoYamashiro, KenjiGotoh, NorimotoMiyake, MasahiroAstakhov, Sergei YOsman, Essam AAl-Obeidan, Saleh AOwaidhah, OhoudAl-Jasim, LeylaShahwan, Sami AlFogarty, Rhys ALeo, PaulYetkin, YazOğuz, ÇilingirKanavi, Mozhgan RezaeiBeni, Afsaneh NaderiYazdani, ShahinAkopov, Evgeny LToh, Kai-YeeHowell, Gareth ROrr, Andrew CGoh, YufenMeah, Wee YangPeh, Su QinKosior-Jarecka, EwaLukasik, UrszulaKrumbiegel, MandyVithana, Eranga NWong, Tien YinLiu, YutaoKoch, Allison E AshleyChalla, PratapRautenbach, Robyn MMackey, David AHewitt, Alex WMitchell, PaulWang, Jie JinZiskind, AriCarmichael, TrevorRamakrishnan, RangappaNarendran, KalpanaVenkatesh, RangarajVijayan, SaravananZhao, PeiquanChen, XueyiGuadarrama-Vallejo, DaliaCheng, Ching YuPerera, Shamira AHusain, RahatHo, Su-Ling
Source
Nature Genetics. 47(4)
Subject
Biological Sciences
Genetics
Rare Diseases
Human Genome
Prevention
2.1 Biological and endogenous factors
Aetiology
Animals
Asian People
Calcium Channels
Case-Control Studies
Chromosome Mapping
Exfoliation Syndrome
Genetic Predisposition to Disease
Genome-Wide Association Study
Glaucoma
Open-Angle
HEK293 Cells
HeLa Cells
Humans
Japan
MCF-7 Cells
Mice
Mice
Inbred C57BL
Polymorphism
Single Nucleotide
Tumor Cells
Cultured
Blue Mountains Eye Study GWAS Team
Wellcome Trust Case Control Consortium 2
Hela Cells
Medical and Health Sciences
Developmental Biology
Agricultural biotechnology
Bioinformatics and computational biology
Language
Abstract
Exfoliation syndrome (XFS) is the most common recognizable cause of open-angle glaucoma worldwide. To better understand the etiology of XFS, we conducted a genome-wide association study (GWAS) of 1,484 cases and 1,188 controls from Japan and followed up the most significant findings in a further 6,901 cases and 20,727 controls from 17 countries across 6 continents. We discovered a genome-wide significant association between a new locus (CACNA1A rs4926244) and increased susceptibility to XFS (odds ratio (OR) = 1.16, P = 3.36 × 10(-11)). Although we also confirmed overwhelming association at the LOXL1 locus, the key SNP marker (LOXL1 rs4886776) demonstrated allelic reversal depending on the ancestry group (Japanese: OR(A allele) = 9.87, P = 2.13 × 10(-217); non-Japanese: OR(A allele) = 0.49, P = 2.35 × 10(-31)). Our findings represent the first genetic locus outside of LOXL1 surpassing genome-wide significance for XFS and provide insight into the biology and pathogenesis of the disease.