학술논문

On the Estimation of Heritability with Family-Based and Population-Based Samples.
Document Type
Article
Source
BioMed Research International. 8/3/2015, Vol. 2015, p1-9. 9p.
Subject
*ANALYSIS of variance
*CONFIDENCE intervals
*FAMILIES
*LONGITUDINAL method
*MATHEMATICS
*PUBLIC health surveillance
*REGRESSION analysis
*RESEARCH funding
*PHENOTYPES
*GENETIC markers
*GENOMICS
*DATA analysis software
*DESCRIPTIVE statistics
Language
ISSN
2314-6133
Abstract
For a family-based sample, the phenotypic variance-covariance matrix can be parameterized to include the variance of a polygenic effect that has then been estimated using a variance component analysis. However, with the advent of large-scale genomic data, the genetic relationship matrix (GRM) can be estimated and can be utilized to parameterize the variance of a polygenic effect for population-based samples. Therefore narrow sense heritability, which is both population and trait specific, can be estimated with both population- and family-based samples. In this study we estimate heritability from both family-based and population-based samples, collected in Korea, and the heritability estimates from the pooled samples were, for height, 0.60; body mass index (BMI), 0.32; log-transformed triglycerides (log TG), 0.24; total cholesterol (TCHL), 0.30; high-density lipoprotein (HDL), 0.38; low-density lipoprotein (LDL), 0.29; systolic blood pressure (SBP), 0.23; and diastolic blood pressure (DBP), 0.24. Furthermore, we found differences in how heritability is estimated—in particular the amount of variance attributable to common environment in twins can be substantial—which indicates heritability estimates should be interpreted with caution. [ABSTRACT FROM AUTHOR]