학술논문

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4
Document Type
article
Source
Cell Reports. 39(6)
Subject
Biological Sciences
Bioinformatics and Computational Biology
Emerging Infectious Diseases
HIV/AIDS
Infectious Diseases
Cancer
Genetics
Human Genome
Sexually Transmitted Infections
Infection
Antigens
Viral
Chromosomes
Herpesvirus 8
Human
Humans
Mi-2 Nucleosome Remodeling and Deacetylase Complex
Plasmids
RNA
Long Noncoding
Sarcoma
Kaposi
Tumor Microenvironment
Virus Latency
ADNP
CHD4
CP: Microbiology
ChAHP complex
DNA virus
KSHV
LANA
episome tethering
lncRNAs
mini-TurboID
viral reactivation
Biochemistry and Cell Biology
Medical Physiology
Biological sciences
Language
Abstract
Kaposi sarcoma-associated herpesvirus (KSHV) establishes a latent infection in the cell nucleus, but where KSHV episomal genomes are tethered and the mechanisms underlying KSHV lytic reactivation are unclear. Here, we study the nuclear microenvironment of KSHV episomes and show that the KSHV latency-lytic replication switch is regulated via viral long non-coding (lnc)RNA-CHD4 (chromodomain helicase DNA binding protein 4) interaction. KSHV episomes localize with CHD4 and ADNP proteins, components of the cellular ChAHP complex. The CHD4 and ADNP proteins occupy the 5'-region of the highly inducible lncRNAs and terminal repeats of the KSHV genome together with latency-associated nuclear antigen (LANA). Viral lncRNA binding competes with CHD4 DNA binding, and KSHV reactivation sequesters CHD4 from the KSHV genome, which is also accompanied by detachment of KSHV episomes from host chromosome docking sites. We propose a model in which robust KSHV lncRNA expression determines the latency-lytic decision by regulating LANA/CHD4 binding to KSHV episomes.