학술논문

Context-Dependent and Disease-Specific Diversity in Protein Interactions within Stress Granules
Document Type
article
Source
Cell. 172(3)
Subject
Biochemistry and Cell Biology
Biological Sciences
Neurosciences
Brain Disorders
Neurodegenerative
ALS
Rare Diseases
Neurological
Amyotrophic Lateral Sclerosis
Animals
Cytoplasmic Granules
Drosophila melanogaster
HEK293 Cells
HeLa Cells
Humans
Neurons
Protein Interaction Maps
Protein Transport
Ribonucleoproteins
Stress
Physiological
Hela Cells
RNA-binding proteins
amyotrophic lateral sclerosis
granules
heat shock
motor neuron disease
neurodegeneration
phase separation
ribonucleoprotein
stress
Medical and Health Sciences
Developmental Biology
Biological sciences
Biomedical and clinical sciences
Language
Abstract
Stress granules (SGs) are transient ribonucleoprotein (RNP) aggregates that form during cellular stress and are increasingly implicated in human neurodegeneration. To study the proteome and compositional diversity of SGs in different cell types and in the context of neurodegeneration-linked mutations, we used ascorbate peroxidase (APEX) proximity labeling, mass spectrometry, and immunofluorescence to identify ∼150 previously unknown human SG components. A highly integrated, pre-existing SG protein interaction network in unstressed cells facilitates rapid coalescence into larger SGs. Approximately 20% of SG diversity is stress or cell-type dependent, with neuronal SGs displaying a particularly complex repertoire of proteins enriched in chaperones and autophagy factors. Strengthening the link between SGs and neurodegeneration, we demonstrate aberrant dynamics, composition, and subcellular distribution of SGs in cells from amyotrophic lateral sclerosis (ALS) patients. Using three Drosophila ALS/FTD models, we identify SG-associated modifiers of neurotoxicity in vivo. Altogether, our results highlight SG proteins as central to understanding and ultimately targeting neurodegeneration.