학술논문

Replicated methylation changes associated with eczema herpeticum and allergic response
Document Type
article
Source
Clinical Epigenetics. 11(1)
Subject
Biological Sciences
Genetics
Eczema / Atopic Dermatitis
Clinical Research
Human Genome
Prevention
Aetiology
2.1 Biological and endogenous factors
Case-Control Studies
CpG Islands
DNA Methylation
Dermatitis
Atopic
Eosinophils
Epigenesis
Genetic
Female
Genome-Wide Association Study
Humans
Immunoglobulin E
Interleukin-4
Kaposi Varicelliform Eruption
Male
Severity of Illness Index
Th2 Cells
Atopic dermatitis
Eczema herpeticum
Human epigenetics
DNA methylation
Infinium Methylation 450K array
Methylation EPIC array
Infinium Methylation 450K array
Clinical Sciences
Paediatrics and Reproductive Medicine
Language
Abstract
BackgroundAlthough epigenetic mechanisms are important risk factors for allergic disease, few studies have evaluated DNA methylation differences associated with atopic dermatitis (AD), and none has focused on AD with eczema herpeticum (ADEH+). We will determine how methylation varies in AD individuals with/without EH and associated traits. We modeled differences in genome-wide DNA methylation in whole blood cells from 90 ADEH+, 83 ADEH-, and 84 non-atopic, healthy control subjects, replicating in 36 ADEH+, 53 ADEH-, and 55 non-atopic healthy control subjects. We adjusted for cell-type composition in our models and used genome-wide and candidate-gene approaches.ResultsWe replicated one CpG which was significantly differentially methylated by severity, with suggestive replication at four others showing differential methylation by phenotype or severity. Not adjusting for eosinophil content, we identified 490 significantly differentially methylated CpGs (ADEH+ vs healthy controls, genome-wide). Many of these associated with severity measures, especially eosinophil count (431/490 sites).ConclusionsWe identified a CpG in IL4 associated with serum tIgE levels, supporting a role for Th2 immune mediating mechanisms in AD. Changes in eosinophil level, a measure of disease severity, are associated with methylation changes, providing a potential mechanism for phenotypic changes in immune response-related traits.