학술논문

Molecular classification of zebrafish retinal ganglion cells links genes to cell types to behavior
Document Type
article
Source
Neuron. 109(4)
Subject
Biological Psychology
Biomedical and Clinical Sciences
Neurosciences
Psychology
Genetics
Eye Disease and Disorders of Vision
1.1 Normal biological development and functioning
Underpinning research
Eye
Good Health and Well Being
Animals
Animals
Genetically Modified
Female
Gene Expression Regulation
Developmental
Locomotion
Male
Photic Stimulation
Retinal Ganglion Cells
Zebrafish
behavior
cell atlas
eomes
genetic markers
genome engineering
ipRGCs
physiology
single-cell transcriptomics
visual pathways
Cognitive Sciences
Neurology & Neurosurgery
Biological psychology
Language
Abstract
Retinal ganglion cells (RGCs) form an array of feature detectors, which convey visual information to central brain regions. Characterizing RGC diversity is required to understand the logic of the underlying functional segregation. Using single-cell transcriptomics, we systematically classified RGCs in adult and larval zebrafish, thereby identifying marker genes for >30 mature types and several developmental intermediates. We used this dataset to engineer transgenic driver lines, enabling specific experimental access to a subset of RGC types. Expression of one or few transcription factors often predicts dendrite morphologies and axonal projections to specific tectal layers and extratectal targets. In vivo calcium imaging revealed that molecularly defined RGCs exhibit specific functional tuning. Finally, chemogenetic ablation of eomesa+ RGCs, which comprise melanopsin-expressing types with projections to a small subset of central targets, selectively impaired phototaxis. Together, our study establishes a framework for systematically studying the functional architecture of the visual system.