학술논문

CryoPoseNet: End-to-End Simultaneous Learning of Single-particle Orientation and 3D Map Reconstruction from Cryo-electron Microscopy Data
Document Type
Conference
Source
2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW) ICCVW Computer Vision Workshops (ICCVW), 2021 IEEE/CVF International Conference on. :4049-4059 Oct, 2021
Subject
Computing and Processing
Solid modeling
Three-dimensional displays
Image resolution
Pose estimation
Pipelines
Computer architecture
Decoding
Language
ISSN
2473-9944
Abstract
Cryogenic electron microscopy (cryo-EM) provides images from different copies of the same biomolecule in arbitrary orientations. Here, we present an end-to-end unsupervised approach that learns individual particle orientations directly from cryo-EM data while reconstructing the 3D map of the biomolecule following random initialization. The approach relies on an auto-encoder architecture where the latent space is explicitly interpreted as orientations used by the decoder to form an image according to the physical projection model. We evaluate our method on simulated data and show that it is able to reconstruct 3D particle maps from noisy- and CTF-corrupted 2D projection images of unknown particle orientations.