학술논문

pyGenomeTracks: reproducible plots for multivariate genomic datasets.
Document Type
Article
Source
Bioinformatics. Feb2021, Vol. 37 Issue 3, p422-423. 2p.
Subject
*BIOINFORMATICS
*MOTIVATION (Psychology)
*INTERNET servers
*COMPUTER software
Language
ISSN
1367-4803
Abstract
Motivation Generating publication ready plots to display multiple genomic tracks can pose a serious challenge. Making desirable and accurate figures requires considerable effort. This is usually done by hand or using a vector graphic software. Results pyGenomeTracks (PGT) is a modular plotting tool that easily combines multiple tracks. It enables a reproducible and standardized generation of highly customizable and publication ready images. Availability and implementation PGT is available through a graphical interface on https://usegalaxy.eu and through the command line. It is provided on conda via the bioconda channel, on pip and it is openly developed on github: https://github.com/deeptools/pyGenomeTracks. Supplementary information Supplementary data are available at Bioinformatics online. [ABSTRACT FROM AUTHOR]