학술논문

Genetic 3′ UTR variation is associated with human pigmentation characteristics and sensitivity to sunlight.
Document Type
Article
Source
Experimental Dermatology. Oct2017, Vol. 26 Issue 10, p896-903. 8p.
Subject
*HUMAN skin color
*ULTRAVIOLET radiation
*MICRORNA
*MELANOMA
*LOGISTIC regression analysis
Language
ISSN
0906-6705
Abstract
Sunlight exposure induces signalling pathways leading to the activation of melanin synthesis and tanning response. Micro RNAs (mi RNAs) can regulate the expression of genes involved in pigmentation pathways by binding to the complementary sequence in their 3′untranslated regions (3′ UTRs). Therefore, 3′ UTR SNPs are predicted to modify the ability of mi RNAs to target genes, resulting in differential gene expression. In this study, we investigated the role in pigmentation and sun-sensitivity traits, as well as in melanoma susceptibility, of 38 different 3′ UTR SNPs from 38 pigmentation-related genes. A total of 869 individuals of Spanish origin (526 melanoma cases and 343 controls) were analysed. The association of genotypic data with pigmentation traits was analysed via logistic regression. Web-based tools for predicting the effect of genetic variants in micro RNA-binding sites in 3′ UTR gene regions were also used. Seven 3′ UTR SNPs showed a potential implication in melanoma risk phenotypes. This association is especially noticeable for two of them, rs2325813 in the MLPH gene and rs752107 in the WNT3A gene. These two SNPs were predicted to disrupt a mi RNA-binding site and to impact on mi RNA- mRNA interaction. To our knowledge, this is the first time that these two 3′ UTR SNPs have been associated with sun-sensitivity traits. We state the potential implication of these SNPs in human pigmentation and sensitivity to sunlight, possibly as a result of changes in the level of gene expression through the disruption of putative mi RNA-binding sites. [ABSTRACT FROM AUTHOR]