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eBook
T-Cell Development: Methods and Protocols. 11/15/2022. 2580:25-49
Report
Tissue Procurement and Natural History Study of Patients With Non-Small Cell Lung Cancer, Small Cell Lung Cancer, Extrapulmonary Small Cell Cancer, Pulmonary Neuroendocrine Tumors, and Thymic Epithelial Tumors
Weir BA, Woo MS, Getz G, Perner S, Ding L, Beroukhim R, Lin WM, Province MA, Kraja A, Johnson LA, Shah K, Sato M, Thomas RK, Barletta JA, Borecki IB, Broderick S, Chang AC, Chiang DY, Chirieac LR, Cho J, Fujii Y, Gazdar AF, Giordano T, Greulich H, Hanna M, Johnson BE, Kris MG, Lash A, Lin L, Lindeman N, Mardis ER, McPherson JD, Minna JD, Morgan MB, Nadel M, Orringer MB, Osborne JR, Ozenberger B, Ramos AH, Robinson J, Roth JA, Rusch V, Sasaki H, Shepherd F, Sougnez C, Spitz MR, Tsao MS, Twomey D, Verhaak RG, Weinstock GM, Wheeler DA, Winckler W, Yoshizawa A, Yu S, Zakowski MF, Zhang Q, Beer DG, Wistuba II, Watson MA, Garraway LA, Ladanyi M, Travis WD, Pao W, Rubin MA, Gabriel SB, Gibbs RA, Varmus HE, Wilson RK, Lander ES, Meyerson M. Characterizing the cancer genome in lung adenocarcinoma. Nature. 2007 Dec 6;450(7171):893-8. doi: 10.1038/nature06358. Epub 2007 Nov 4.
Imielinski M, Berger AH, Hammerman PS, Hernandez B, Pugh TJ, Hodis E, Cho J, Suh J, Capelletti M, Sivachenko A, Sougnez C, Auclair D, Lawrence MS, Stojanov P, Cibulskis K, Choi K, de Waal L, Sharifnia T, Brooks A, Greulich H, Banerji S, Zander T, Seidel D, Leenders F, Ansen S, Ludwig C, Engel-Riedel W, Stoelben E, Wolf J, Goparju C, Thompson K, Winckler W, Kwiatkowski D, Johnson BE, Janne PA, Miller VA, Pao W, Travis WD, Pass HI, Gabriel SB, Lander ES, Thomas RK, Garraway LA, Getz G, Meyerson M. Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing.Cell . 2012 Sep 14;150(6):1107-20. doi: 10.1016/j.cell .2012.08.029.
Rikova K, Guo A, Zeng Q, Possemato A, Yu J, Haack H, Nardone J, Lee K, Reeves C, Li Y, Hu Y, Tan Z, Stokes M, Sullivan L, Mitchell J, Wetzel R, Macneill J, Ren JM, Yuan J, Bakalarski CE, Villen J, Kornhauser JM, Smith B, Li D, Zhou X, Gygi SP, Gu TL, Polakiewicz RD, Rush J, Comb MJ. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.Cell . 2007 Dec 14;131(6):1190-203. doi: 10.1016/j.cell .2007.11.025.
Wong-Rolle A, Dong Q, Zhu Y, Divakar P, Hor JL, Kedei N, Wong M, Tillo D, Conner EA, Rajan A, Schrump DS, Jin C, Germain RN, Zhao C. Spatial meta-transcriptomics reveal associations of intratumor bacteria burden with lung cancercells showing a distinct oncogenic signature. J Immunother Cancer. 2022 Jul;10(7):e004698. doi: 10.1136/jitc-2022-004698.
Weir BA, Woo MS, Getz G, Perner S, Ding L, Beroukhim R, Lin WM, Province MA, Kraja A, Johnson LA, Shah K, Sato M, Thomas RK, Barletta JA, Borecki IB, Broderick S, Chang AC, Chiang DY, Chirieac LR, Cho J, Fujii Y, Gazdar AF, Giordano T, Greulich H, Hanna M, Johnson BE, Kris MG, Lash A, Lin L, Lindeman N, Mardis ER, McPherson JD, Minna JD, Morgan MB, Nadel M, Orringer MB, Osborne JR, Ozenberger B, Ramos AH, Robinson J, Roth JA, Rusch V, Sasaki H, Shepherd F, Sougnez C, Spitz MR, Tsao MS, Twomey D, Verhaak RG, Weinstock GM, Wheeler DA, Winckler W, Yoshizawa A, Yu S, Zakowski MF, Zhang Q, Beer DG, Wistuba II, Watson MA, Garraway LA, Ladanyi M, Travis WD, Pao W, Rubin MA, Gabriel SB, Gibbs RA, Varmus HE, Wilson RK, Lander ES, Meyerson M. Characterizing the cancer genome in lung adenocarcinoma. Nature. 2007 Dec 6;450(7171):893-8. doi: 10.1038/nature06358. Epub 2007 Nov 4.
Imielinski M, Berger AH, Hammerman PS, Hernandez B, Pugh TJ, Hodis E, Cho J, Suh J, Capelletti M, Sivachenko A, Sougnez C, Auclair D, Lawrence MS, Stojanov P, Cibulskis K, Choi K, de Waal L, Sharifnia T, Brooks A, Greulich H, Banerji S, Zander T, Seidel D, Leenders F, Ansen S, Ludwig C, Engel-Riedel W, Stoelben E, Wolf J, Goparju C, Thompson K, Winckler W, Kwiatkowski D, Johnson BE, Janne PA, Miller VA, Pao W, Travis WD, Pass HI, Gabriel SB, Lander ES, Thomas RK, Garraway LA, Getz G, Meyerson M. Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing.
Rikova K, Guo A, Zeng Q, Possemato A, Yu J, Haack H, Nardone J, Lee K, Reeves C, Li Y, Hu Y, Tan Z, Stokes M, Sullivan L, Mitchell J, Wetzel R, Macneill J, Ren JM, Yuan J, Bakalarski CE, Villen J, Kornhauser JM, Smith B, Li D, Zhou X, Gygi SP, Gu TL, Polakiewicz RD, Rush J, Comb MJ. Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.
Wong-Rolle A, Dong Q, Zhu Y, Divakar P, Hor JL, Kedei N, Wong M, Tillo D, Conner EA, Rajan A, Schrump DS, Jin C, Germain RN, Zhao C. Spatial meta-transcriptomics reveal associations of intratumor bacteria burden with lung cancer
eBook
T-Cell Development: Methods and Protocols. 01/01/2016. 1323:65-73
Academic Journal
Mohammed A; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Wang W; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Arreola M; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Solomon BD; Department of Pediatrics, Division of Allergy and Immunology, Stanford School of Medicine, Stanford, CA 94304, USA.; Slepicka PF; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Hubka KM; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Nguyen HD; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Zheng Z; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Chavez MG; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA.; Yeh CY; Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA.; Department of Medicine, Stanford School of Medicine, Stanford, CA 94305, USA.; Kim DK; Department of Bioengineering, Stanford University, Stanford, CA 94305, USA.; Ma MR; Cardiovascular Institute, Stanford University, Stanford, CA 94305, USA.; Department of Cardiothoracic Surgery, Division of Pediatric Cardiac Surgery, Stanford University, Stanford, CA 94304, USA.; Martin E; Department of Cardiothoracic Surgery, Division of Pediatric Cardiac Surgery, Stanford University, Stanford, CA 94304, USA.; Li L; Department of Pediatrics, Division of Neonatology, Stanford School of Medicine, Stanford, CA 94304, USA.; Pasca AM; Department of Pediatrics, Division of Neonatology, Stanford School of Medicine, Stanford, CA 94304, USA.; Winn VD; Department of Obstetrics and Gynecology, Stanford School of Medicine, Stanford, CA, USA.; Gifford CA; Department of Pediatrics, Division of Cardiology, Stanford School of Medicine, Stanford, CA 94305, USA.; Department of Genetics, Stanford University, Stanford, CA 94305, USA.; Kedlian VR; Wellcome Sanger Institute, Cambridge, UK.; Cambridge Stem Cell Institute, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, UK.; Park JE; Wellcome Sanger Institute, Cambridge, UK.; Khatri P; Institute for Immunity, Transplantation, and Infection, Stanford University, Stanford, CA 94304, USA.; Center for Biomedical Informatics Research, Department of Medicine, School of Medicine, Stanford University, CA 94305, USA.; Hollander GA; Department of Pediatrics and Institute of Developmental and Regenerative Medicine, University of Oxford, Oxford, UK.; Department of Biosystems and Engineering, ETH Zurich, Zurich, Switzerland.; Botnar Institute of Immune Engineering, Basel, Switzerland.; Roncarolo MG; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.; Sebastiano V; Department of Obstetrics and Gynecology, Stanford School of Medicine, Stanford, CA, USA.; Teichmann SA; Cambridge Stem Cell Institute, Jeffrey Cheah Biomedical Centre, Cambridge Biomedical Campus, University of Cambridge, Cambridge, UK.; Department of Medicine, University of Cambridge, Cambridge, UK.; CIFAR Macmillan Multi-scale Human Programme, CIFAR, Toronto, Canada.; Gentles AJ; Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA.; Department of Pathology, Stanford School of Medicine, Stanford, CA 94305, USA.; Weinacht KG; Department of Pediatrics, Division of Hematology, Oncology, Stem Cell Transplantation, and Regenerative Medicine, Stanford School of Medicine, Stanford, CA 94304, USA.
Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 101688624 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2470-9468 (Electronic) Linking ISSN: 24709468 NLM ISO Abbreviation: Sci Immunol Subsets: MEDLINE
Academic Journal
Zhang Y; School of Biological Engineering, Xinxiang University, Xinxiang, Henan 453000, China.; Chen M; School of Biological Engineering, Xinxiang University, Xinxiang, Henan 453000, China.; College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, Shanxi 030801, China.; Niu R; College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, Shanxi 030801, China.; Guo D; School of Biological Engineering, Xinxiang University, Xinxiang, Henan 453000, China.; Sun Z; College of Veterinary Medicine, Shanxi Agricultural University, Jinzhong, Shanxi 030801, China.
Publisher: American Chemical Society Country of Publication: United States NLM ID: 0374755 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5118 (Electronic) Linking ISSN: 00218561 NLM ISO Abbreviation: J Agric Food Chem Subsets: MEDLINE
eBook
Immunological Tolerance: Methods and Protocols. 01/01/2007. 380:107-123
Academic Journal
Hayama M; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Ishii H; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Miyauchi M; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Yoshida M; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Hagiwara N; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Muramtatu W; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Namiki K; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Endo R; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Miyao T; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Akiyama N; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.; Akiyama T; Laboratory for Immune Homeostasis, RIKEN Center of Integrative Medical Sciences, Yokohama, Japan.; Immunobiology, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.
Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE
Academic Journal
Matsumoto M; Department of Molecular Pathology, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan.; Sobral F; Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; Thymus Development and Function Laboratory, Instituto de Biologia Molecular e Celular, Porto, Portugal.; Cardoso JS; Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; Thymus Development and Function Laboratory, Instituto de Biologia Molecular e Celular, Porto, Portugal.; Oya T; Department of Molecular Pathology, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan.; Tsuneyama K; Department of Pathology and Laboratory Medicine, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan.; Matsumoto M; Division of Molecular Immunology, Institute for Enzyme Research, Tokushima University, Tokushima, Japan. mitsuru@tokushima-u.ac.jp.; Alves NL; Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal. nalves@i3s.up.pt.; Thymus Development and Function Laboratory, Instituto de Biologia Molecular e Celular, Porto, Portugal. nalves@i3s.up.pt.
Publisher: Kluwer Academic/Plenum Publishers Country of Publication: United States NLM ID: 0121103 Publication Model: Print Cited Medium: Print ISSN: 0065-2598 (Print) Linking ISSN: 00652598 NLM ISO Abbreviation: Adv Exp Med Biol Subsets: MEDLINE
Academic Journal
Ushio, Aya ; Matsuda-Lennikov, Mami ; Kalle-Youngoue, Felix ; Shimizu, Akihide ; Abdelmaksoud, Abdalla ; Kelly, Michael C. ; Ishimaru, Naozumi ; Takahama, Yousuke
In Cell Reports 23 April 2024 43(4)
Academic Journal
Huisman BD; Department of Immunology, Harvard Medical School, Boston, MA, USA.; Michelson DA; Department of Immunology, Harvard Medical School, Boston, MA, USA; Harvard-MIT Program in Health Sciences and Technology, Harvard Medical School, Boston, MA, USA; PhD Program in Immunology, Harvard Medical School, Boston, MA, USA.; Rubin SA; Harvard-MIT Program in Health Sciences and Technology, Harvard Medical School, Boston, MA, USA; PhD Program in Immunology, Harvard Medical School, Boston, MA, USA; Stem Cell Program and Division of Hematology/Oncology, Boston Children's Hospital and Dana-Farber Cancer Institute, Boston, MA, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.; Kohlsaat K; Department of Cardiac Surgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.; Gomarga W; Stem Cell Program and Division of Hematology/Oncology, Boston Children's Hospital and Dana-Farber Cancer Institute, Boston, MA, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.; Fang Y; Department of Immunology, Harvard Medical School, Boston, MA, USA.; Lee JM; Department of Cardiac Surgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.; Del Nido P; Department of Cardiac Surgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA; Department of Surgery, Harvard Medical School, Boston, MA, USA.; Nathan M; Department of Cardiac Surgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA; Department of Surgery, Harvard Medical School, Boston, MA, USA.; Benoist C; Department of Immunology, Harvard Medical School, Boston, MA, USA.; Zon L; Stem Cell Program and Division of Hematology/Oncology, Boston Children's Hospital and Dana-Farber Cancer Institute, Boston, MA, USA; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA; Howard Hughes Medical Institute and Boston Children's Hospital, Boston, MA, USA.; Mathis D; Department of Immunology, Harvard Medical School, Boston, MA, USA. Electronic address: dm@hms.harvard.edu.
Publisher: Cell Press Country of Publication: United States NLM ID: 9432918 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4180 (Electronic) Linking ISSN: 10747613 NLM ISO Abbreviation: Immunity Subsets: MEDLINE
Academic Journal
In iScience 19 July 2024 27(7)
Academic Journal
132 Int'l J. Legal Med. 1665 (2018) / International Journal of Legal Medicine, Vol. 132, Issue 6 (November 2018), pp. 1665-1670
Academic Journal
Ribeiro C; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.; ICBAS - Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Porto, Portugal.; Ferreirinha P; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.; Landry JJM; Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.; Macedo F; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.; Departamento de Ciências Médicas, Universidade de Aveiro, Aveiro, Portugal.; Sousa LG; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.; ICBAS - Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Porto, Portugal.; Pinto R; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.; Benes V; Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.; Alves NL; i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal. nalves@i3s.up.pt.; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal. nalves@i3s.up.pt.
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101524092 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-4889 (Electronic) NLM ISO Abbreviation: Cell Death Dis Subsets: MEDLINE
Academic Journal
Patel, Sandesh Kumar; Zhdanovskaya, Nadezda; Sergio, Ilaria; Cardinale, Antonella; Rosichini, Marco; Varricchio, Claudia; Pace, Eleonora; Capalbo, Carlo; Locatelli, Franco; Macone, Alberto; Velardi, Enrico; Palermo, Rocco; Felli, Maria Pia
Academic Journal
Tanaka, Pedro Paranhos; Oliveira, Ernna Hérida; Vieira-Machado, Mayara Cristina; Duarte, Max Jordan; Assis, Amanda Freire; Bombonato-Prado, Karina Fittipaldi; Passos, Geraldo Aleixo
Academic Journal
Chiu H; Benaroya Research Institute.; Weinstein KN; Benaroya Research Institute.; Spath S; Benaroya Research Institute.; Hu A; Benaroya Research Institute.; Varela S; Benaroya Research Institute.; Obata-Ninomiya K; Benaroya Research Institute.; Ziegler SF; Benaroya Research Institute.
Publisher: Oxford University Press Country of Publication: United States NLM ID: 2985117R Publication Model: Print Cited Medium: Internet ISSN: 1550-6606 (Electronic) Linking ISSN: 00221767 NLM ISO Abbreviation: J Immunol Subsets: MEDLINE
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