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In Cell Reports 27 May 2025 44(5)

Takata, Hiroshi ; Mitchell, Julie L. ; Pacheco, Julian ; Pagliuzza, Amélie ; Pinyakorn, Suteeraporn ; Buranapraditkun, Supranee ; Sacdalan, Carlo ; Leyre, Louise ; Nathanson, Sam ; Kakazu, Juyeon C. ; Intasan, Jintana ; Prueksakaew, Peeriya ; Chomchey, Nitiya ; Phanuphak, Nittaya ; de Souza, Mark ; Haddad, Elias K. ; Rolland, Morgane ; Tovanabutra, Sodsai ; Vasan, Sandhya ; Hsu, Denise C. ; Chomont, Nicolas ; Trautmann, Lydie

In Cell Host & Microbe 13 September 2023 31(9):1494-1506

Cheong, Jin-Gyu ; Ravishankar, Arjun ; Sharma, Siddhartha ; Parkhurst, Christopher N. ; Grassmann, Simon A. ; Wingert, Claire K. ; Laurent, Paoline ; Ma, Sai ; Paddock, Lucinda ; Miranda, Isabella C. ; Karakaslar, Emin Onur ; Nehar-Belaid, Djamel ; Thibodeau, Asa ; Bale, Michael J. ; Kartha, Vinay K. ; Yee, Jim K. ; Mays, Minh Y. ; Jiang, Chenyang ; Daman, Andrew W. ; Martinez de Paz, Alexia ; Ahimovic, Dughan ; Ramos, Victor ; Lercher, Alexander ; Nielsen, Erik ; Alvarez-Mulett, Sergio ; Zheng, Ling ; Earl, Andrew ; Yallowitz, Alisha ; Robbins, Lexi ; LaFond, Elyse ; Weidman, Karissa L. ; Racine-Brzostek, Sabrina ; Yang, He S. ; Price, David R. ; Leyre, Louise ; Rendeiro, André F. ; Ravichandran, Hiranmayi ; Kim, Junbum ; Borczuk, Alain C. ; Rice, Charles M. ; Jones, R. Brad ; Schenck, Edward J. ; Kaner, Robert J. ; Chadburn, Amy ; Zhao, Zhen ; Pascual, Virginia ; Elemento, Olivier ; Schwartz, Robert E. ; Buenrostro, Jason D. ; Niec, Rachel E. ; Barrat, Franck J. ; Lief, Lindsay ; Sun, Joseph C. ; Ucar, Duygu ; Josefowicz, Steven Z.

In Cell 31 August 2023 186(18):3882-3902

Cossarini, Francesca; Shang, Joan; Krek, Azra; Al-Taie, Zainab; Hou, Ruixue; Canales-Herrerias, Pablo; Tokuyama, Minami; Tankelevich, Michael; Tillowitz, Adam; Jha, Divya; Livanos, Alexandra E.; Leyre, Louise; Uzzan, Mathieu; Martinez-Delgado, Gustavo; Taylor, Matthew D.; Sharma, Keshav; Bourgonje, Arno R.; Cruz, Michael; Ioannou, Giorgio; Dawson, Travis

Science Immunology; 2024, Vol. 9 Issue 100, p1-19, 19p

Sondrini, Abigail; Grasberger, Paula; Kucukural, Alper; Leyre, Louise; Jones, Brad; Clayton, Kiera

Journal of Immunology; 2025 Supplement, Vol. 214, p1032-1033, 2p

Herrera, Alberto; Leyre, Louise; Zumbo, Paul; Betel, Doron; Amiama, Maider; Tan Thinh Huymh; Feng Wang; Jones, Richard Brad

Journal of Immunology; 2025 Supplement, Vol. 214, p46-47, 2p

Ferreira IATM; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Herrera A; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Huynh TT; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Stone E; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Linden NL; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Ovies C; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Ren Y; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Bittar C; Laboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA.; Pal VK; Laboratory of Retrovirology, The Rockefeller University, New York, New York, USA.; Naing E; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Sinha P; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Danesh A; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Stevenson E; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Vedova S; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Liu F; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Leyre L; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Shea S; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Wells E; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Miller IG; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA.; Canis M; Laboratory of Retrovirology, The Rockefeller University, New York, New York, USA.; Teixeira AR; Laboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA.; Moir S; 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Division of Hematology & Medical Oncology, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Institute for Computational Biomedicine, Weill Cornell Medical College, New York, New York, USA.; Halvas EK; Department of Medicine, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.; Lee GQ; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Scheck R; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Caskey M; Laboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA.; Bieniasz PD; Laboratory of Retrovirology, The Rockefeller University, New York, New York, USA.; Howard Hughes Medical Institute, The Rockefeller University, New York, New York, USA.; Board NL; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA.; Nussenzweig MC; Laboratory of Molecular Immunology, The Rockefeller University, New York, NY, USA.; Howard Hughes Medical Institute, The Rockefeller University, New York, New York, USA.; Jones RB; Infectious Diseases Division, Department of Medicine, Weill Cornell Medical College, New York, New York, USA. rbjones@med.cornell.edu.; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, New York, USA. rbjones@med.cornell.edu.; Immunology and Microbial Pathogenesis Program, Weill Cornell Medicine, New York, NY, USA. rbjones@med.cornell.edu.; HSS Research Institute, Hospital for Special Surgery, New York, New York, USA. rbjones@med.cornell.edu.

Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

Ferreira IATM; Herrera A; Huynh TT; Board NL; Stone E; Linden NL; Ren Y; Bittar C; Pal VK; Vedova S; Naing E; Sinha P; Danesh A; Ovies C; Liu F; Leyre L; Canis M; Teixeira AR; Moir S; Chun TW; Kovacs C; Zumbo P; Betel D; Halvas EK; Lee GQ; Caskey M; Bieniasz PD; Nussenzweig MC; Jones RB

Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Scheck R; Laboratory of Translational Immunology of Viral Infections, Department of Infectious Diseases and Critical Care Medicine, Charité-Universitätsmedizin Berlin, Berlin Institute of Health, Berlin, Germany.; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.; Melzer M; Laboratory of Systems Biology of Infectious Diseases, Charité-Universitätsmedizin, Berlin, Germany.; Gladkov G; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.; Leyre L; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.; Ward AR; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.; Reeves DB; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA.; Perkins N; Laboratory of Translational Immunology of Viral Infections, Department of Infectious Diseases and Critical Care Medicine, Charité-Universitätsmedizin Berlin, Berlin Institute of Health, Berlin, Germany.; Huynh TT; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.; McMahon DK; Division of Infectious Diseases, University of Pittsburgh, Pittsburgh, PA, USA.; Department of Infectious Diseases and Microbiology, University of Pittsburgh School of Public Health, Pittsburgh, PA, USA.; Bosch RJ; Center for Biostatistics in AIDS Research, Harvard TH Chan School of Public Health, Boston, MA, USA.; Macatangay BJ; Division of Infectious Diseases, University of Pittsburgh, Pittsburgh, PA, USA.; Department of Infectious Diseases and Microbiology, University of Pittsburgh School of Public Health, Pittsburgh, PA, USA.; Cyktor JC; Division of Infectious Diseases, University of Pittsburgh, Pittsburgh, PA, USA.; Eron JJ; Division of Infectious Diseases, University of North Carolina, Chapel Hill, NC, USA.; Mellors JW; Division of Infectious Diseases, University of Pittsburgh, Pittsburgh, PA, USA.; Gandhi RT; Infectious Diseases Division, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.; Buchauer L; Laboratory of Systems Biology of Infectious Diseases, Charité-Universitätsmedizin, Berlin, Germany.; Jones RB; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA. rbjones@med.cornell.edu.; Gaebler C; Laboratory of Translational Immunology of Viral Infections, Department of Infectious Diseases and Critical Care Medicine, Charité-Universitätsmedizin Berlin, Berlin Institute of Health, Berlin, Germany. christian.gaebler@charite.de.

Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Pardons, Marion; Baxter, Amy E.; Massanella, Marta; Pagliuzza, Amélie; Fromentin, Rémi; Dufour, Caroline; Leyre, Louise; Routy, Jean-Pierre; Kaufmann, Daniel E.; Chomont, Nicolas

PLoS Pathogens. 2/27/2019, Vol. 15 Issue 2, p1-28. 28p.

Leyre L; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Mustapha F; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Herrera A; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Lee E; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Huntsman E; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Zumbo P; Applied Bioinformatics Core, Weill Cornell Medicine, New York, NY, USA.; Weiler J; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Sinha P; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Naing E; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Smith C; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Kovacs C; Maple Leaf Medical Clinic and Division of Infectious Diseases, Department of Medicine, University of Toronto, Toronto, Canada.; Galiano M; Molecular Cytology Core Facility, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Wahman N; Molecular Cytology Core Facility, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Betel D; Applied Bioinformatics Core, Weill Cornell Medicine, New York, NY, USA.; Clayton KL; Department of Pathology, University of Massachusetts Chan Medical School, Worcester, MA, USA.; Huse M; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Jones RB; Infectious Disease Division, Weill Cornell Medicine, New York, NY, USA.; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.

Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Herrera, Alberto; Leyre, Louise; Weiler, Jared; Linden, Noemi Luise; Huynh, Tan Thinh; Wang, Feng; Kovacs, Colin; Caskey, Marina; Zumbo, Paul; Amiama, Maider Astorkia; Terry, Sandra; Ho, Ya-Chi; Betel, Doron; Jones, R. Brad

bioRxiv

Stevenson, Eva M.; Terry, Sandra; Copertino, Dennis; Leyre, Louise; Danesh, Ali; Weiler, Jared; Ward, Adam R.; Khadka, Pragya; McNeil, Evan; Bernard, Kevin; Miller, Itzayana G.; Ellsworth, Grant B.; Johnston, Carrie D.; Finkelsztein, Eli J.; Zumbo, Paul; Betel, Doron; Dündar, Friederike; Duncan, Maggie C.; Lapointe, Hope R.; Speckmaier, Sarah

Nature Communications; 8/19/2022, Vol. 13 Issue 1, p1-15, 15p

Leyre, Louise; Jones, R. Brad

Journal of Clinical Investigation. Apr2022, Vol. 132 Issue 7, p1-4. 4p.

Massanella, Marta; Puthanakit, Thanyawee; Leyre, Louise; Jupimai, Thidarat; Sawangsinth, Panadda; Souza, Mark de; Suntarattiwong, Piyarat; Kosalarksa, Pope; Borkird, Thitiporn; Kanjanavanit, Suparat; Chokephaibulkit, Kulkanya; Hansudewechakul, Rawiwan; Petdachai, Witaya; Mitchell, Julie L; Robb, Merlin L; Trautmann, Lydie; Ananworanich, Jintanat; Chomont, Nicolas; Groups, RV474/HIVNAT194 and RV475/HIVNAT 209 Study

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Yanqin Ren; Szu Han Huang; Macedo, Amanda B.; Ward, Adam R.; Alberto, Winiffer D. Conce; Klevorn, Thais; Leyre, Louise; Copertino, Dennis C.; Mota, Talia M.; Dora Chan; Truong, Ronald; Rohwetter, Thomas; Zumbo, Paul; Dündar, Friederike; Betel, Doron; Kovacs, Colin; Benko, Erika; Bosque, Alberto; Jones, R. Brad

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Nature Medicine. 28:766-779

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Journal of Virology. May2020, Vol. 94 Issue 9, p1-45. 45p.

Colby, Donn J.; Trautmann, Lydie; Pinyakorn, Suteeraporn; Leyre, Louise; Pagliuzza, Amélie; Kroon, Eugène; Rolland, Morgane

Nature Medicine. July, 2018, Vol. 24 Issue 7, p923, 4 p.