학술논문

Dictionary learning compressed sensing reconstruction: pilot validation of accelerated echo planar J-resolved spectroscopic imaging in prostate cancer
Document Type
article
Source
Magnetic Resonance Materials in Physics, Biology and Medicine. 35(4)
Subject
Biomedical and Clinical Sciences
Engineering
Information and Computing Sciences
Communications Engineering
Oncology and Carcinogenesis
Computer Vision and Multimedia Computation
Bioengineering
Cancer
Clinical Research
Urologic Diseases
Prostate Cancer
Biomedical Imaging
Choline
Echo-Planar Imaging
Humans
Imaging
Three-Dimensional
Magnetic Resonance Imaging
Magnetic Resonance Spectroscopy
Male
Prostatic Neoplasms
Echo planar J-resolved spectroscopic imaging
Prostate cancer
Compressed sensing
Citrate
Myo-inositol
Nuclear Medicine & Medical Imaging
Language
Abstract
ObjectivesThis study aimed at developing dictionary learning (DL) based compressed sensing (CS) reconstruction for randomly undersampled five-dimensional (5D) MR Spectroscopic Imaging (3D spatial + 2D spectral) data acquired in prostate cancer patients and healthy controls, and test its feasibility at 8x and 12x undersampling factors.Materials and methodsProspectively undersampled 5D echo-planar J-resolved spectroscopic imaging (EP-JRESI) data were acquired in nine prostate cancer (PCa) patients and three healthy males. The 5D EP-JRESI data were reconstructed using DL and compared with gradient sparsity-based Total Variation (TV) and Perona-Malik (PM) methods. A hybrid reconstruction technique, Dictionary Learning-Total Variation (DLTV), was also designed to further improve the quality of reconstructed spectra.ResultsThe CS reconstruction of prospectively undersampled (8x and 12x) 5D EP-JRESI data acquired in prostate cancer and healthy subjects were performed using DL, DLTV, TV and PM. It is evident that the hybrid DLTV method can unambiguously resolve 2D J-resolved peaks including myo-inositol, citrate, creatine, spermine and choline.ConclusionImproved reconstruction of the accelerated 5D EP-JRESI data was observed using the hybrid DLTV. Accelerated acquisition of in vivo 5D data with as low as 8.33% samples (12x) corresponds to a total scan time of 14 min as opposed to a fully sampled scan that needs a total duration of 2.4 h (TR = 1.2 s, 32 [Formula: see text]×16 [Formula: see text]×8 [Formula: see text], 512 [Formula: see text] and 64 [Formula: see text]).