학술논문

Subcongenic analysis of a quantitative trait locus affecting body weight and glucose metabolism in zinc transporter 7 (znt7)-knockout mice
Document Type
article
Source
BMC Genomic Data. 20(1)
Subject
Biological Sciences
Genetics
Diabetes
Nutrition
Obesity
Prevention
Biotechnology
Human Genome
Aetiology
2.1 Biological and endogenous factors
Underpinning research
1.1 Normal biological development and functioning
Metabolic and endocrine
Animals
Body Weight
Cation Transport Proteins
Chromosomes
Mammalian
Genomics
Glucose
Mice
Mice
Knockout
Phenotype
Polymorphism
Single Nucleotide
Quantitative Trait Loci
Transcriptome
Slc30a7
ZnT7
QTL
Congenic mice
Zinc transporter
Body weight
Glucose metabolism
Htatip2
Genetics & Heredity
Language
Abstract
BackgroundA genome-wide mapping study using male F2 zinc transporter 7-knockout mice (znt7-KO) and their wild type littermates in a mixed 129P1/ReJ (129P1) and C57BL/6J (B6) background identified a quantitative trait locus (QTL) on chromosome 7, which had a synergistic effect on body weight gain and fat deposit with the znt7-null mutation.ResultsThe genetic segment for body weight on mouse chromosome 7 was investigated by newly created subcongenic znt7-KO mouse strains carrying different lengths of genomic segments of chromosome 7 from the 129P1 donor strain in the B6 background. We mapped the sub-QTL for body weight in the proximal region of the previously mapped QTL, ranging from 47.4 to 64.4 megabases (Mb) on chromosome 7. The 129P1 donor allele conferred lower body weight gain and better glucose handling during intraperitoneal glucose challenge than the B6 allele control. We identified four candidate genes, including Htatip2, E030018B13Rik, Nipa1, and Atp10a, in this sub-QTL using quantitative RT-PCR and cSNP detection (single nucleotide polymorphisms in the protein coding region).ConclusionsThis study dissected the genetic determinates of body weight and glucose metabolism in znt7-KO mice. The study demonstrated that a 17-Mb long 129P1 genomic region on mouse chromosome 7 conferred weight reduction and improved glucose tolerance in znt7-KO male mice. Among the four candidate genes identified, Htatip2 is the most likely candidate gene involved in the control of body weight based on its function in regulation of lipid metabolism. The candidate genes discovered in this study lay a foundation for future studies of their roles in development of metabolic diseases, such as obesity and type 2 diabetes.