학술논문

Accelerating 3D Medical Image Segmentation by Adaptive Small-Scale Target Localization
Document Type
article
Source
Journal of Imaging, Vol 7, Iss 2, p 35 (2021)
Subject
deep learning
medical image segmentation
computed tomography (CT)
magnetic resonance imaging (MRI)
Photography
TR1-1050
Computer applications to medicine. Medical informatics
R858-859.7
Electronic computers. Computer science
QA75.5-76.95
Language
English
ISSN
2313-433X
Abstract
The prevailing approach for three-dimensional (3D) medical image segmentation is to use convolutional networks. Recently, deep learning methods have achieved human-level performance in several important applied problems, such as volumetry for lung-cancer diagnosis or delineation for radiation therapy planning. However, state-of-the-art architectures, such as U-Net and DeepMedic, are computationally heavy and require workstations accelerated with graphics processing units for fast inference. However, scarce research has been conducted concerning enabling fast central processing unit computations for such networks. Our paper fills this gap. We propose a new segmentation method with a human-like technique to segment a 3D study. First, we analyze the image at a small scale to identify areas of interest and then process only relevant feature-map patches. Our method not only reduces the inference time from 10 min to 15 s but also preserves state-of-the-art segmentation quality, as we illustrate in the set of experiments with two large datasets.